NCIMB number | NCIMB 13930 |
Deposit type | Bacteria |
Type strain | Yes |
GMO | No |
Taxon name | Shewanella violacea |
Depositor designation | DSS12 |
Preservation method | Lyophilised |
Price band | A |
Media | 211 |
Gas regime | aerobic |
Growth factors (and/or information) | Growth after 10 days. Obligate psychrophile therefore media has to be chilled prior to use. |
ACDP category | 1 |
Colony Edge | Entire |
Colony Surface | Smooth & Shiny |
Colony Shape | Circular |
Colony Elevation | Convex |
Colony Colour | Off White |
Colony Opacity | Transparent |
Cellular Shape | Filamentous |
Cellular Arrangement | Groups |
Gram stain | Gram Negative |
Depositor Company | Japanese Collection of Microorganisms (JCM) |
Depositor Address | Hirosawa, Wako-shi Saitama 351-01 Japan |
Source | "Deep-sea sediment, 5110m depth, Ryukyu trench" |
Isolated by | Chiaki Kato |
Date of Accession | 18/10/2002 |
History | Y.Nogi DSS12 |
Other collection IDs | "CIP 106290, JCM 10179" |
Yeast? | False |
K12 | No |
References | Cell-free protein synthesis using cell extract of Pseudomonas fluorescens and CspA promoter, Biochem Biophys Res Commun 319(2), 671-676, 2004 Cloning and characterization of dihydrofolate reductases from deep-sea bacteria, J Biochem 147(4), 591-599, 2010 Cloning and overproduction of the rpoZ gene encoding an RNA polymerase omega subunit from a deep-sea piezophilic Shewanella violacea strain DSS12, DNA Seq 15(2), 118-122, 2004 Cloning of two cold shock genes, cspA and cspG, from the deep-sea psychrophilic bacterium Shewanella violacea strain DSS12, FEMS Microbiol Lett 178(1), 123-128, 1999 Comparison of the gene expression of aspartate beta-D-semialdehyde dehydrogenase at elevated hydrostatic pressure in deep-sea bacteria, J Biochem (Tokyo) 121(4), 717-723, 1997 Isolation and properties of barophilic and barotolerant bacteria from deep-sea mud samples, Biodivers Conserv 4, 1-9, 1995 Isolation of the rpoD gene encoding the principal sigma factor of the deep-sea piezophilic bacterium Shewanella violacea strain DSS12 and its overexpression in Escherichia coli, Biosci Biotechnol Biochem 65(1), 190-193, 2001 Mechanisms of gene expression controlled by pressure in deep-sea microorganisms, Extremophiles 2(3), 149-154, 1998 Open reading frame 3 of the barotolerant bacterium strain DSS12 is complementary with cydD in Escherichia coli: cydD functions are required for cell stability at high pressure, J Biochem (Tokyo) 120(2), 301-305, 1996 Pressure-regulated biosynthesis of cytochrome bd in piezo- and psychrophilic deep-sea bacterium Shewanella violacea DSS12, Extremophiles 9(3), 247-253, 2005 Pressure regulation of soluble cytochromes c in a deep-Sea piezophilic bacterium, Shewanella violacea, J Bacteriol 182(10), 2945-2952, 2000 Structure of genes in a pressure-regulated operon and adjacent. regions from a barotolerant bacterium strain DSS12, J Mar Biotechnol 5, 210-218, 1997 Taxonomic studies of deep-sea barophilic Shewanella strains and description of Shewanella violacea sp. nov, Arch Microbiol 170(5), 331-338, 1998 The narQP genes for a two-component regulatory system from the deep-sea bacterium Shewanella violacea DSS12, DNA Seq 19(3), 308-312, 2008 Validation of the publication of new names and new combinations previously effectively published outside the IJSB. List No. 69, Int J Syst Bacteriol 49, 341-342, 1999 |
浙江省宁波市镇海区庄市街道兴庄路9号
创e慧谷42号楼B幢401室
NCIMB number | NCIMB 13930 |
Deposit type | Bacteria |
Type strain | Yes |
GMO | No |
Taxon name | Shewanella violacea |
Depositor designation | DSS12 |
Preservation method | Lyophilised |
Price band | A |
Media | 211 |
Gas regime | aerobic |
Growth factors (and/or information) | Growth after 10 days. Obligate psychrophile therefore media has to be chilled prior to use. |
ACDP category | 1 |
Colony Edge | Entire |
Colony Surface | Smooth & Shiny |
Colony Shape | Circular |
Colony Elevation | Convex |
Colony Colour | Off White |
Colony Opacity | Transparent |
Cellular Shape | Filamentous |
Cellular Arrangement | Groups |
Gram stain | Gram Negative |
Depositor Company | Japanese Collection of Microorganisms (JCM) |
Depositor Address | Hirosawa, Wako-shi Saitama 351-01 Japan |
Source | "Deep-sea sediment, 5110m depth, Ryukyu trench" |
Isolated by | Chiaki Kato |
Date of Accession | 18/10/2002 |
History | Y.Nogi DSS12 |
Other collection IDs | "CIP 106290, JCM 10179" |
Yeast? | False |
K12 | No |
References | Cell-free protein synthesis using cell extract of Pseudomonas fluorescens and CspA promoter, Biochem Biophys Res Commun 319(2), 671-676, 2004 Cloning and characterization of dihydrofolate reductases from deep-sea bacteria, J Biochem 147(4), 591-599, 2010 Cloning and overproduction of the rpoZ gene encoding an RNA polymerase omega subunit from a deep-sea piezophilic Shewanella violacea strain DSS12, DNA Seq 15(2), 118-122, 2004 Cloning of two cold shock genes, cspA and cspG, from the deep-sea psychrophilic bacterium Shewanella violacea strain DSS12, FEMS Microbiol Lett 178(1), 123-128, 1999 Comparison of the gene expression of aspartate beta-D-semialdehyde dehydrogenase at elevated hydrostatic pressure in deep-sea bacteria, J Biochem (Tokyo) 121(4), 717-723, 1997 Isolation and properties of barophilic and barotolerant bacteria from deep-sea mud samples, Biodivers Conserv 4, 1-9, 1995 Isolation of the rpoD gene encoding the principal sigma factor of the deep-sea piezophilic bacterium Shewanella violacea strain DSS12 and its overexpression in Escherichia coli, Biosci Biotechnol Biochem 65(1), 190-193, 2001 Mechanisms of gene expression controlled by pressure in deep-sea microorganisms, Extremophiles 2(3), 149-154, 1998 Open reading frame 3 of the barotolerant bacterium strain DSS12 is complementary with cydD in Escherichia coli: cydD functions are required for cell stability at high pressure, J Biochem (Tokyo) 120(2), 301-305, 1996 Pressure-regulated biosynthesis of cytochrome bd in piezo- and psychrophilic deep-sea bacterium Shewanella violacea DSS12, Extremophiles 9(3), 247-253, 2005 Pressure regulation of soluble cytochromes c in a deep-Sea piezophilic bacterium, Shewanella violacea, J Bacteriol 182(10), 2945-2952, 2000 Structure of genes in a pressure-regulated operon and adjacent. regions from a barotolerant bacterium strain DSS12, J Mar Biotechnol 5, 210-218, 1997 Taxonomic studies of deep-sea barophilic Shewanella strains and description of Shewanella violacea sp. nov, Arch Microbiol 170(5), 331-338, 1998 The narQP genes for a two-component regulatory system from the deep-sea bacterium Shewanella violacea DSS12, DNA Seq 19(3), 308-312, 2008 Validation of the publication of new names and new combinations previously effectively published outside the IJSB. List No. 69, Int J Syst Bacteriol 49, 341-342, 1999 |