| NCIMB number | NCIMB 11961 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Achromobacter xylosoxidans |
| Depositor designation | Fredrich55B Hugh12 Kosako85022 |
| Preservation method | Lyophilised |
| Preserved as | Alcaligenes denitrificans subsp. denitrificans |
| Price band | A |
| Media | 001 |
| Gas regime | aerobic |
| Growth factors (and/or information) | Lab8, 25C, 3d: good growth, just visible 24 hrs, soft, easily dispersed. |
| ACDP category | 1 |
| Additional hazard information | Although presently classed as ACDP group 1, this organism is recognised as an opportunist pathogen, particularly of immunocompromised patients, and should be handled with care. |
| Colony Edge | Entire |
| Colony Surface | Smooth/Shiny |
| Colony Shape | Circular |
| Colony Elevation | Low Convex |
| Colony Colour | Off White |
| Colony Opacity | Translucent |
| Cellular Shape | Rods |
| Cellular Motility | Yes |
| Gram stain | Gram Negative |
| Depositor Company | Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSM) |
| Depositor Address | Mascheroder Weg 1b D-38124 Braunschweig Germany |
| Source | Soil |
| Date of Accession | 12/03/1984 |
| History | ATCC -- R.Hugh -- L.R.Fredrich |
| Other collection IDs | ATCC15173 CCUG407 CECT449 CIP77.15 DSM30026 IAM12370 IFO15125 JCM5490 LMG1231 LMG3510 NCTC8582 RIMD0114003 USCC1474 USCC2521 |
| Yeast? | False |
| K12 | No |
| References | Leifson, E. and Hugh, R. (1954) J. gen. Microbiol. 11 pp512-513. Alcaligenes denitrificans n.sp. Pichinoty, F., Veron, M., Mandel, M., Durand, M., Job, C. and Garcia, J-L. (1978) Can. J. Microbiol. 24 pp743-753. Etude physiologique et taxonomique du genre Alcaligenes: A. denitrificans, A. odorans et A. faecalis Kersters, K. and De Ley, J. (1980) In "Microbiological Classification and Identification", M. Goodfellow and R.G. Board eds, pp273-297. London Academic Press. Classification and identification of bacteria by electrophoresis of their proteins. Kiredjian, M., Popoff, M., Coynault, C., LeFevre, M. and Lemelin, M. (1981) Ann. Microbiol. Inst. Pasteur, Paris 132B pp337-374. Taxonomie du genre Alcaligenes. Yamasoto, K. et al (1982) J. gen. appl. Microbiol. 28 pp195-213. Carbon substrate assimilation profiles and other taxonomic features of Alcaligenes faecalis, Alcaligenes ruhlandii and Achromobacter xylosoxidans. Ruger, H.J. and Tan, T.L. (1983) Int. J. Syst. Bact. 33 pp85-89. Separation of Alcaligenes denitrificans sp. nov., nom. rev. from Alcaligenes faecalis on the basis of DNA base composition, DNA homology and nitrate reduction. Yabuuchi et al (1998) Microbiol Immunl 42, 429-438 Coenye T et al (2003) I.J.S.E.M. 53 1825-1831 (Unknown), Int J Syst Bacteriol 47, 243, 1997 (Unknown), Curr Microbiol 27, 79, 1993 (Unknown), Int J Syst Bacteriol 1, 37, 1995 (Unknown), Bergeys Manual Syst Bacteriol 1, 366, 1984 (Unknown), Int J Syst Bacteriol 46, 847, 1996 (Unknown), J Gen Microbiol 11, 513, 1954 cpnDB: a chaperonin sequence database, Genome Res 14(8), 1669-1675, 2004 Seasonal dynamics of bacterioplankton community structure in a eutrophic lake as determined by 5S rRNA analysis, Appl Environ Microbiol 65(7), 3164-3174, 1999 Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples, Appl Environ Microbiol 64(10), 3769-3775, 1998 Alcaligenes piechaudii, a new species of the human clinical specimens and the environment, Int J Syst Bacteriol 36, 282-287, 1986 Distinctive electrophoretic pattern of esterases produced by Alcaligenes species, Res Microbiol 144(3), 221-227, 1993 Emendation of genus Achromobacter and Achromobacter xylosoxidans (Yabuuchi and Yano) and proposal of Achromobacter ruhlandii (Packer and Vishniac) comb. nov., Achromobacter piechaudii (Kiredjian et al.) comb. nov., and Achromobacter xylosoxidans subsp. denitrificans (Ruger and Tan) comb. nov, Microbiol Immunol 42(6), 429-438, 1998 Multilocus Sequence Analysis of Isolates of Achromobacter from Patients with Cystic Fibrosis Reveals Infecting Species Other than Achromobacter xylosoxidans, J Clin Microbiol 50(8), 22675125, 2012 Separation of Alcaligenes denitrificans sp. nov. nom. rev. from Alcaligenes faecalis on the basis of DNA base composition, DNA homology and nitrate reduction, Int J Syst Bacteriol 33, 85-89, 1983 Validation of the publication of new names and new combinations previously effectively published outside the IJSB. List No. 67, Int J Syst Bacteriol 48, 1083-1084, 1998 Alcaligenes denitrificans n.sp, J Gen Microbiol 11(3), 512-513, 1954 Bordetella trematum sp. nov., isolated from wounds and ear infections in humans, and reassessment of Alcaligenes denitrificans Ruger and Tan 1983, Int J Syst Bacteriol 46(4), 849-858, 1996 Characterization of a highly conserved island in the otherwise divergent Bordetella holmesii and Bordetella pertussis genomes, J Bacteriol 188(24), 8385-8394, 2006 Chromobacterium, Eikenella, Kingella, Neisseria, Simonsiella and Vitreoscilla species comprise a major branch of the beta group Proteobacteria by 16S rRNA sequence comparison: transfer of Eikenella and Simonsiella to the family Neisseriacae (emend.), Int J Syst Bacteriol 39, 258-266, 1989 Cloning, expression and characterization of D-aminoacylase from Achromobacter xylosoxidans subsp. denitrificans ATCC 15173, Microbiol Res 168(6), 360-366, 2013 Kerstersia gyiorum gen. nov., sp. nov., a novel Alcaligenes faecalis-like organism isolated from human clinical samples, and reclassification of Alcaligenes denitrificans Ruger and Tan 1983 as Achromobacter denitrificans comb. nov, Int J Syst Evol Microbiol 53(6), 1825-1831, 2003 Nitric oxide reductase (norB) gene sequence analysis reveals discrepancies with nitrite reductase (nir) gene phylogeny in cultivated denitrifiers, Environ Microbiol 9(4), 1072-1077, 2007 Pseudomonas flavescens sp. nov., isolated from walnut blight cankers, Int J Syst Bacteriol 44(3), 410-415, 1994 The incidence of nirS and nirK and their genetic heterogeneity in cultivated denitrifiers, Environ Microbiol 8(11), 2012-2021, 2006 |
| NCIMB number | NCIMB 11961 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Achromobacter xylosoxidans |
| Depositor designation | Fredrich55B Hugh12 Kosako85022 |
| Preservation method | Lyophilised |
| Preserved as | Alcaligenes denitrificans subsp. denitrificans |
| Price band | A |
| Media | 001 |
| Gas regime | aerobic |
| Growth factors (and/or information) | Lab8, 25C, 3d: good growth, just visible 24 hrs, soft, easily dispersed. |
| ACDP category | 1 |
| Additional hazard information | Although presently classed as ACDP group 1, this organism is recognised as an opportunist pathogen, particularly of immunocompromised patients, and should be handled with care. |
| Colony Edge | Entire |
| Colony Surface | Smooth/Shiny |
| Colony Shape | Circular |
| Colony Elevation | Low Convex |
| Colony Colour | Off White |
| Colony Opacity | Translucent |
| Cellular Shape | Rods |
| Cellular Motility | Yes |
| Gram stain | Gram Negative |
| Depositor Company | Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSM) |
| Depositor Address | Mascheroder Weg 1b D-38124 Braunschweig Germany |
| Source | Soil |
| Date of Accession | 12/03/1984 |
| History | ATCC -- R.Hugh -- L.R.Fredrich |
| Other collection IDs | ATCC15173 CCUG407 CECT449 CIP77.15 DSM30026 IAM12370 IFO15125 JCM5490 LMG1231 LMG3510 NCTC8582 RIMD0114003 USCC1474 USCC2521 |
| Yeast? | False |
| K12 | No |
| References | Leifson, E. and Hugh, R. (1954) J. gen. Microbiol. 11 pp512-513. Alcaligenes denitrificans n.sp. Pichinoty, F., Veron, M., Mandel, M., Durand, M., Job, C. and Garcia, J-L. (1978) Can. J. Microbiol. 24 pp743-753. Etude physiologique et taxonomique du genre Alcaligenes: A. denitrificans, A. odorans et A. faecalis Kersters, K. and De Ley, J. (1980) In "Microbiological Classification and Identification", M. Goodfellow and R.G. Board eds, pp273-297. London Academic Press. Classification and identification of bacteria by electrophoresis of their proteins. Kiredjian, M., Popoff, M., Coynault, C., LeFevre, M. and Lemelin, M. (1981) Ann. Microbiol. Inst. Pasteur, Paris 132B pp337-374. Taxonomie du genre Alcaligenes. Yamasoto, K. et al (1982) J. gen. appl. Microbiol. 28 pp195-213. Carbon substrate assimilation profiles and other taxonomic features of Alcaligenes faecalis, Alcaligenes ruhlandii and Achromobacter xylosoxidans. Ruger, H.J. and Tan, T.L. (1983) Int. J. Syst. Bact. 33 pp85-89. Separation of Alcaligenes denitrificans sp. nov., nom. rev. from Alcaligenes faecalis on the basis of DNA base composition, DNA homology and nitrate reduction. Yabuuchi et al (1998) Microbiol Immunl 42, 429-438 Coenye T et al (2003) I.J.S.E.M. 53 1825-1831 (Unknown), Int J Syst Bacteriol 47, 243, 1997 (Unknown), Curr Microbiol 27, 79, 1993 (Unknown), Int J Syst Bacteriol 1, 37, 1995 (Unknown), Bergeys Manual Syst Bacteriol 1, 366, 1984 (Unknown), Int J Syst Bacteriol 46, 847, 1996 (Unknown), J Gen Microbiol 11, 513, 1954 cpnDB: a chaperonin sequence database, Genome Res 14(8), 1669-1675, 2004 Seasonal dynamics of bacterioplankton community structure in a eutrophic lake as determined by 5S rRNA analysis, Appl Environ Microbiol 65(7), 3164-3174, 1999 Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples, Appl Environ Microbiol 64(10), 3769-3775, 1998 Alcaligenes piechaudii, a new species of the human clinical specimens and the environment, Int J Syst Bacteriol 36, 282-287, 1986 Distinctive electrophoretic pattern of esterases produced by Alcaligenes species, Res Microbiol 144(3), 221-227, 1993 Emendation of genus Achromobacter and Achromobacter xylosoxidans (Yabuuchi and Yano) and proposal of Achromobacter ruhlandii (Packer and Vishniac) comb. nov., Achromobacter piechaudii (Kiredjian et al.) comb. nov., and Achromobacter xylosoxidans subsp. denitrificans (Ruger and Tan) comb. nov, Microbiol Immunol 42(6), 429-438, 1998 Multilocus Sequence Analysis of Isolates of Achromobacter from Patients with Cystic Fibrosis Reveals Infecting Species Other than Achromobacter xylosoxidans, J Clin Microbiol 50(8), 22675125, 2012 Separation of Alcaligenes denitrificans sp. nov. nom. rev. from Alcaligenes faecalis on the basis of DNA base composition, DNA homology and nitrate reduction, Int J Syst Bacteriol 33, 85-89, 1983 Validation of the publication of new names and new combinations previously effectively published outside the IJSB. List No. 67, Int J Syst Bacteriol 48, 1083-1084, 1998 Alcaligenes denitrificans n.sp, J Gen Microbiol 11(3), 512-513, 1954 Bordetella trematum sp. nov., isolated from wounds and ear infections in humans, and reassessment of Alcaligenes denitrificans Ruger and Tan 1983, Int J Syst Bacteriol 46(4), 849-858, 1996 Characterization of a highly conserved island in the otherwise divergent Bordetella holmesii and Bordetella pertussis genomes, J Bacteriol 188(24), 8385-8394, 2006 Chromobacterium, Eikenella, Kingella, Neisseria, Simonsiella and Vitreoscilla species comprise a major branch of the beta group Proteobacteria by 16S rRNA sequence comparison: transfer of Eikenella and Simonsiella to the family Neisseriacae (emend.), Int J Syst Bacteriol 39, 258-266, 1989 Cloning, expression and characterization of D-aminoacylase from Achromobacter xylosoxidans subsp. denitrificans ATCC 15173, Microbiol Res 168(6), 360-366, 2013 Kerstersia gyiorum gen. nov., sp. nov., a novel Alcaligenes faecalis-like organism isolated from human clinical samples, and reclassification of Alcaligenes denitrificans Ruger and Tan 1983 as Achromobacter denitrificans comb. nov, Int J Syst Evol Microbiol 53(6), 1825-1831, 2003 Nitric oxide reductase (norB) gene sequence analysis reveals discrepancies with nitrite reductase (nir) gene phylogeny in cultivated denitrifiers, Environ Microbiol 9(4), 1072-1077, 2007 Pseudomonas flavescens sp. nov., isolated from walnut blight cankers, Int J Syst Bacteriol 44(3), 410-415, 1994 The incidence of nirS and nirK and their genetic heterogeneity in cultivated denitrifiers, Environ Microbiol 8(11), 2012-2021, 2006 |