| NCIMB number | NCIMB 11054 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Flavobacterium johnsoniae |
| Preservation method | Lyophilised |
| Other catalogue information | Pectolytic |
| Price band | A |
| Media | 001098 |
| Gas regime | aerobic |
| Incubation period | 4 days |
| Growth factors (and/or information) | CM3, 25C, 3d: good growth, soft, coherent but fairly easily dispersed in water |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth, Shiny |
| Colony Shape | Irregular |
| Colony Elevation | Low Convex |
| Colony Colour | Pale And Deep Yellow |
| Colony Opacity | Translucent |
| Cellular Shape | Slender Rod |
| Cellular Size | long |
| Cellular Arrangement | Groups |
| Cellular Motility | Glider |
| Gram stain | Gram Negative |
| Cellular (Other) | 4D: Often Slightly Curved, Parallel Sides |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | "Soil or mud, Rothamsted or Cambridge" |
| Isolated by | R.Y. Stanier |
| Date of Accession | 16/11/1973 |
| History | C.B.van Niel -- HMS -- R.Y.Stanier |
| Other collection IDs | ATCC17061 CIP100931 DSM2064 HMSMYX.1.1.1 |
| Yeast? | False |
| K12 | No |
| References | Stanier R.Y. (1947) J. Bact. 53 pp297-315. Studies on non fruiting myxobacteria. 1. Cytophaga johnsonae n. sp., a chitin-decomposing myxobacterium. Mandel M. and Leadbetter E.R. (1965) J. Bact. 90 pp1795-1796. Deoxyribonucleic acid base composition of myxobacteria. IJSB (1996) 46: 141 IJSEM (2003) 53:83 (Unknown), Int J Syst Bacteriol 46, 627, 1996 (Unknown), Int J Syst Bacteriol 30, 289, 1980 Approved Lists of Bacterial Names, Int J Syst Bacteriol 30, 225-420, 1980 Chemotaxonomic and phenotypic characterization of the strains of species in the Flavobacterium-Cytophaga complex, J Gen Appl Microbiol 27, 57-107, 1981 Phylogenetic analysis and taxonomic study of marine Cytophaga-like bacteria: proposal for Tenacibaculum gen. nov. with Tenacibaculum maritimum comb. nov. and Tenacibaculum ovolyticum comb. nov., and description of Tenacibaculum mesophilum sp. nov. and Tenacibaculum amylolyticum sp. nov, Int J Syst Evol Microbiol 51(5), 1639-1652, 2001 Phylogenetic diversity of the genus Cytophaga revealed by 16S rRNA sequencing and menaquinone analysis, J Gen Microbiol 139 Pt 6, 1155-1161, 1993 A partial phylogenetic analysis of the "flavobacter-bacteroides" phylum: basis for taxonomic restructuring, Syst Appl Microbiol 15(4), 513-521, 1992 Cutting a Gordian knot: emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom. nov. (basonym Cytophaga aquatilis Strohl and Tait 1978), Int J Syst Bacteriol 46, 128-148, 1996 Transmission and detection of Flavobacterium columnare in channel catfish Ictalurus punctatus, Dis Aquat Organ 63(2-3), 129-138, 2005 Polyamine distribution profiles in newly validated genera and species within the Flavobacterium-Flexibacter-Cytophaga-Sphingobacterium complex, Microbios 106 Suppl 2, 105-116, 2001 Cloning and characterization of the Flavobacterium johnsoniae (Cytophaga johnsonae) gliding motility gene, gldA, Proc Natl Acad Sci U S A 94(22), 12139-12144, 1997 Cloning and characterization of the Flavobacterium johnsoniae gliding-motility genes gldB and gldC, J Bacteriol 182(4), 911-918, 2000 Deoxyribonucleic acid base composition of myxobacteria, J Bacteriol 90, 1795-1796, 1965 Deoxyribonucleic acid relatedness and phenotypic characterization of Flexibacter columnaris sp. nov., nom. rev., Flexibacter psychrophilus sp. nov., nom rev., and Flexibacter maritimus Wakabayashi, Hikida, and Masumura 1986, Int J Syst Bacteriol 39, 346-354, 1989 Development of techniques for the genetic manipulation of the gliding bacterium Cytophaga johnsonae, J Bacteriol 178(3), 583-590, 1996 Flavobacterium johnsoniae gliding motility genes identified by mariner mutagenesis, J Bacteriol 187(20), 6943-6952, 2005 Flavobacterium johnsoniae SprA is a cell surface protein involved in gliding motility, J Bacteriol 189(19), 7145-7150, 2007 Molecular and biochemical characterization of a carbapenem-hydrolysing beta-lactamase from Flavobacterium johnsoniae, J Antimicrob Chemother 51(2), 267-273, 2003 Mutations in Flavobacterium johnsoniae gldF and gldG disrupt gliding motility and interfere with membrane localization of GldA, J Bacteriol 184(9), 2370-2378, 2002 Mutations in Flavobacterium johnsoniae secDF result in defects in gliding motility and chitin utilization., J Bacteriol 188(1), 348-351, 2006 Mutations in Flavobacterium johnsoniae sprE Result in Defects in Gliding Motility and Protein Secretion, J Bacteriol 193(19), 5322-5327, 2011 Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis, Appl Environ Microbiol 75(21), 6864-6875, 2009 SprB is a cell surface component of the Flavobacterium johnsoniae gliding motility machinery, J Bacteriol 190(8), 2851-2857, 2008 Transposon insertions in the Flavobacterium johnsoniae ftsX gene disrupt gliding motility and cell division, J Bacteriol 182(6), 1671-1679, 2000 Use of suppressive subtractive hybridization to identify Flavobacterium columnare DNA sequences not shared with Flavobacterium johnsoniae, Lett Appl Microbiol 46(6), 605-612, 2008 |
| NCIMB number | NCIMB 11054 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Flavobacterium johnsoniae |
| Preservation method | Lyophilised |
| Other catalogue information | Pectolytic |
| Price band | A |
| Media | 001098 |
| Gas regime | aerobic |
| Incubation period | 4 days |
| Growth factors (and/or information) | CM3, 25C, 3d: good growth, soft, coherent but fairly easily dispersed in water |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth, Shiny |
| Colony Shape | Irregular |
| Colony Elevation | Low Convex |
| Colony Colour | Pale And Deep Yellow |
| Colony Opacity | Translucent |
| Cellular Shape | Slender Rod |
| Cellular Size | long |
| Cellular Arrangement | Groups |
| Cellular Motility | Glider |
| Gram stain | Gram Negative |
| Cellular (Other) | 4D: Often Slightly Curved, Parallel Sides |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | "Soil or mud, Rothamsted or Cambridge" |
| Isolated by | R.Y. Stanier |
| Date of Accession | 16/11/1973 |
| History | C.B.van Niel -- HMS -- R.Y.Stanier |
| Other collection IDs | ATCC17061 CIP100931 DSM2064 HMSMYX.1.1.1 |
| Yeast? | False |
| K12 | No |
| References | Stanier R.Y. (1947) J. Bact. 53 pp297-315. Studies on non fruiting myxobacteria. 1. Cytophaga johnsonae n. sp., a chitin-decomposing myxobacterium. Mandel M. and Leadbetter E.R. (1965) J. Bact. 90 pp1795-1796. Deoxyribonucleic acid base composition of myxobacteria. IJSB (1996) 46: 141 IJSEM (2003) 53:83 (Unknown), Int J Syst Bacteriol 46, 627, 1996 (Unknown), Int J Syst Bacteriol 30, 289, 1980 Approved Lists of Bacterial Names, Int J Syst Bacteriol 30, 225-420, 1980 Chemotaxonomic and phenotypic characterization of the strains of species in the Flavobacterium-Cytophaga complex, J Gen Appl Microbiol 27, 57-107, 1981 Phylogenetic analysis and taxonomic study of marine Cytophaga-like bacteria: proposal for Tenacibaculum gen. nov. with Tenacibaculum maritimum comb. nov. and Tenacibaculum ovolyticum comb. nov., and description of Tenacibaculum mesophilum sp. nov. and Tenacibaculum amylolyticum sp. nov, Int J Syst Evol Microbiol 51(5), 1639-1652, 2001 Phylogenetic diversity of the genus Cytophaga revealed by 16S rRNA sequencing and menaquinone analysis, J Gen Microbiol 139 Pt 6, 1155-1161, 1993 A partial phylogenetic analysis of the "flavobacter-bacteroides" phylum: basis for taxonomic restructuring, Syst Appl Microbiol 15(4), 513-521, 1992 Cutting a Gordian knot: emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom. nov. (basonym Cytophaga aquatilis Strohl and Tait 1978), Int J Syst Bacteriol 46, 128-148, 1996 Transmission and detection of Flavobacterium columnare in channel catfish Ictalurus punctatus, Dis Aquat Organ 63(2-3), 129-138, 2005 Polyamine distribution profiles in newly validated genera and species within the Flavobacterium-Flexibacter-Cytophaga-Sphingobacterium complex, Microbios 106 Suppl 2, 105-116, 2001 Cloning and characterization of the Flavobacterium johnsoniae (Cytophaga johnsonae) gliding motility gene, gldA, Proc Natl Acad Sci U S A 94(22), 12139-12144, 1997 Cloning and characterization of the Flavobacterium johnsoniae gliding-motility genes gldB and gldC, J Bacteriol 182(4), 911-918, 2000 Deoxyribonucleic acid base composition of myxobacteria, J Bacteriol 90, 1795-1796, 1965 Deoxyribonucleic acid relatedness and phenotypic characterization of Flexibacter columnaris sp. nov., nom. rev., Flexibacter psychrophilus sp. nov., nom rev., and Flexibacter maritimus Wakabayashi, Hikida, and Masumura 1986, Int J Syst Bacteriol 39, 346-354, 1989 Development of techniques for the genetic manipulation of the gliding bacterium Cytophaga johnsonae, J Bacteriol 178(3), 583-590, 1996 Flavobacterium johnsoniae gliding motility genes identified by mariner mutagenesis, J Bacteriol 187(20), 6943-6952, 2005 Flavobacterium johnsoniae SprA is a cell surface protein involved in gliding motility, J Bacteriol 189(19), 7145-7150, 2007 Molecular and biochemical characterization of a carbapenem-hydrolysing beta-lactamase from Flavobacterium johnsoniae, J Antimicrob Chemother 51(2), 267-273, 2003 Mutations in Flavobacterium johnsoniae gldF and gldG disrupt gliding motility and interfere with membrane localization of GldA, J Bacteriol 184(9), 2370-2378, 2002 Mutations in Flavobacterium johnsoniae secDF result in defects in gliding motility and chitin utilization., J Bacteriol 188(1), 348-351, 2006 Mutations in Flavobacterium johnsoniae sprE Result in Defects in Gliding Motility and Protein Secretion, J Bacteriol 193(19), 5322-5327, 2011 Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis, Appl Environ Microbiol 75(21), 6864-6875, 2009 SprB is a cell surface component of the Flavobacterium johnsoniae gliding motility machinery, J Bacteriol 190(8), 2851-2857, 2008 Transposon insertions in the Flavobacterium johnsoniae ftsX gene disrupt gliding motility and cell division, J Bacteriol 182(6), 1671-1679, 2000 Use of suppressive subtractive hybridization to identify Flavobacterium columnare DNA sequences not shared with Flavobacterium johnsoniae, Lett Appl Microbiol 46(6), 605-612, 2008 |