| NCIMB number | NCIMB 2197 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Halorubrum sodomense |
| Depositor designation | RD-26 |
| Preservation method | Lyophilised |
| Other catalogue information | Extreme halophile |
| Price band | B |
| Media | 235 |
| Gas regime | aerobic |
| Growth factors (and/or information) | ATCC medium 1218, 37C, 5d: fair growth |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth/Shiny |
| Colony Shape | Circular |
| Colony Elevation | Convex |
| Colony Colour | Bright Red-Orange |
| Colony Opacity | Translucent |
| Cellular Shape | Pleomorphic Rod |
| Cellular Motility | Yes |
| Gram stain | Gram Negative |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | Dead Sea |
| Date of Isolation | 05/01/1980 |
| Date of Accession | 30/08/1983 |
| History | A.Oren |
| Other collection IDs | ATCC33755 DSM3755 IFO14740 |
| GenInfo Identifier (EMBL, GenBank & DDBJ) | X82169 |
| Yeast? | False |
| K12 | No |
| References | Int. J. syst. Bact. (1983) 33 p385 IJSB (1996) 46(2): 625-26 IJSEM (2004) 54:1214 Int J Syst Evol Microbiol, May 2010; 60: 1196 - 1199. (Unknown), J Gen Appl Microbiol 41, 153, 1995 A multilocus sequence analysis approach to the phylogeny and taxonomy of the Halobacteriales, Int J Syst Evol Microbiol 61(12), 2984-2995, 2011 A thermophilic amyloglucosidase from Halobacterium sodomense, a halophilic bacterium from the Dead Sea, Curr Microbiol 8, 225-230, 1983 Bacteriorhodopsin in a bloom of halobacteria in the Dead Sea, Arch Microbiol 130, 185-187, 1981 Box C/D RNA guides for the ribose methylation of archaeal tRNAs. The tRNATrp intron guides the formation of two ribose-methylated nucleosides in the mature tRNATrp, Nucleic Acids Res 29(22), 4518-4529, 2001 Classification of non-alkaliphilic halobacteria based on numerical taxonomy and polar lipid composition, and description of Haloarcula gen. nov and Haloferax gen. nov, Syst Appl Microbiol 8, 89-99, 1986 dam methylation in the archaebacteria, J Gen Microbiol 132(11), 3055-3059, 1986 Deoxyribonucleic acid relatedness among species of Haloarcula and other halobacteria, Biochem Cell Biol 68, 106-110, 1990 Diversity of alkaliphilic halobacteria: proposals for transfer of Natronobacterium vacuolatum, Natronobacterium magadii, and Natronobacterium pharaonis to Halorubrum, Natrialba, and Natronomonas gen. nov., respectively, as Halorubrum vacuolatum comb. nov., Natrialba magadii comb. nov., and Natronomonas pharaonis comb. nov., respectively, Int J Syst Bacteriol 47(3), 853-857, 1997 DNA-DNA homology studies among strains of Haloferax and other halobacteria, Curr Microbiol 18, 253-256, 1989 Further refinement of the phylogeny of the Halobacteriaceae based on the full-length RNA polymerase subunit B (rpoB) gene, Int J Syst Evol Microbiol 60(10), 2398-2408, 2010 Halobacterium sodomense sp. nov., a Dead Sea halobacterium with an extremely high magnesium requirement, Int J Syst Bacteriol 33, 381-386, 1983 Lipid compsition of Halobacterium lacusprofundi, FEMS Microbiol Lett 66, 199-202, 1990 Long-term preservation of halophilic archaebacteria and thermoacidophilic archaebacteria by liquid drying, J Microbiol Methods 16, 281-287, 1992 Molecular cloning and nucleotide sequence of a gene for alkaline cellulase from Bacillus sp. KSM-635, J Gen Microbiol 136(7), 1327-1334, 1990 Nucleic acid studies on halophilic archaebacteria, J Gen Microbiol 131, 165-173, 1985 Oren A, A thermophilic amyloglucosidase from Halobacterium sodomense, a halophilic bacterium from the Dead Sea Curr Microbiol 8, 225-230, 1983 Partial sequence of the gene for a serine protease from a halophilic archaeum Haloferax mediterranei R4, and nucleotide sequences of 16S rRNA encoding genes from severalhalophilic archaea, Experientia 49, 503-513, 1993 Survey of antimicrophilic susceptibility of moderately halophilic eubacteria and extremely halophilic aerobic archaeobacteria: utilization of antimicrobial resistance as a genetic marker, Syst Appl Microbiol 16, 352-360, 1993 Taxonomy of the family Halobacteriaceae and the description of two new genera Halorubrobacterium and Natrialba, J Gen Appl Microbiol 41, 333-350, 1995 The glycolipid of Halobacterium sodomense, J Gen Microbiol 136, 2327-2331, 1990 Tranfer of Halobacterium saccharovorum, Halobacterium sodomense, Halobacterium trapanicum NRC 34041 and Halobacterium lacusprofundi to the genus Halorubrum gen. nov., as Halorubrum saccharovorum comb. nov., Halorubrum sodomense comb. nov., Halorubrum trapanicum comb. nov., Halorubrum lacusprofundi comb. nov, Syst Appl Microbiol 18, 237-243, 1995 Transfer of Halobacterium saccharovorum, Halobacterium sodomense, Halobacterium trapanicum NRC 34021 and Halobacterium lacusprofundi to the genus Halorubrum gen, nov, as Halorubrum saccharovorum combnov, Halorubrum sodomense combnov, Halorubrum trapanicum combnov, and Halorubrum lacusprofundi combnov Syst Appl Microbiol 18, 237-243, 1995 Validation of the publication of new names and new combinations previously effectively published outside the IJSB. No. 56, Int J Syst Bacteriol 46, 362-363, 1996 |
| NCIMB number | NCIMB 2197 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Halorubrum sodomense |
| Depositor designation | RD-26 |
| Preservation method | Lyophilised |
| Other catalogue information | Extreme halophile |
| Price band | B |
| Media | 235 |
| Gas regime | aerobic |
| Growth factors (and/or information) | ATCC medium 1218, 37C, 5d: fair growth |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth/Shiny |
| Colony Shape | Circular |
| Colony Elevation | Convex |
| Colony Colour | Bright Red-Orange |
| Colony Opacity | Translucent |
| Cellular Shape | Pleomorphic Rod |
| Cellular Motility | Yes |
| Gram stain | Gram Negative |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | Dead Sea |
| Date of Isolation | 05/01/1980 |
| Date of Accession | 30/08/1983 |
| History | A.Oren |
| Other collection IDs | ATCC33755 DSM3755 IFO14740 |
| GenInfo Identifier (EMBL, GenBank & DDBJ) | X82169 |
| Yeast? | False |
| K12 | No |
| References | Int. J. syst. Bact. (1983) 33 p385 IJSB (1996) 46(2): 625-26 IJSEM (2004) 54:1214 Int J Syst Evol Microbiol, May 2010; 60: 1196 - 1199. (Unknown), J Gen Appl Microbiol 41, 153, 1995 A multilocus sequence analysis approach to the phylogeny and taxonomy of the Halobacteriales, Int J Syst Evol Microbiol 61(12), 2984-2995, 2011 A thermophilic amyloglucosidase from Halobacterium sodomense, a halophilic bacterium from the Dead Sea, Curr Microbiol 8, 225-230, 1983 Bacteriorhodopsin in a bloom of halobacteria in the Dead Sea, Arch Microbiol 130, 185-187, 1981 Box C/D RNA guides for the ribose methylation of archaeal tRNAs. The tRNATrp intron guides the formation of two ribose-methylated nucleosides in the mature tRNATrp, Nucleic Acids Res 29(22), 4518-4529, 2001 Classification of non-alkaliphilic halobacteria based on numerical taxonomy and polar lipid composition, and description of Haloarcula gen. nov and Haloferax gen. nov, Syst Appl Microbiol 8, 89-99, 1986 dam methylation in the archaebacteria, J Gen Microbiol 132(11), 3055-3059, 1986 Deoxyribonucleic acid relatedness among species of Haloarcula and other halobacteria, Biochem Cell Biol 68, 106-110, 1990 Diversity of alkaliphilic halobacteria: proposals for transfer of Natronobacterium vacuolatum, Natronobacterium magadii, and Natronobacterium pharaonis to Halorubrum, Natrialba, and Natronomonas gen. nov., respectively, as Halorubrum vacuolatum comb. nov., Natrialba magadii comb. nov., and Natronomonas pharaonis comb. nov., respectively, Int J Syst Bacteriol 47(3), 853-857, 1997 DNA-DNA homology studies among strains of Haloferax and other halobacteria, Curr Microbiol 18, 253-256, 1989 Further refinement of the phylogeny of the Halobacteriaceae based on the full-length RNA polymerase subunit B (rpoB) gene, Int J Syst Evol Microbiol 60(10), 2398-2408, 2010 Halobacterium sodomense sp. nov., a Dead Sea halobacterium with an extremely high magnesium requirement, Int J Syst Bacteriol 33, 381-386, 1983 Lipid compsition of Halobacterium lacusprofundi, FEMS Microbiol Lett 66, 199-202, 1990 Long-term preservation of halophilic archaebacteria and thermoacidophilic archaebacteria by liquid drying, J Microbiol Methods 16, 281-287, 1992 Molecular cloning and nucleotide sequence of a gene for alkaline cellulase from Bacillus sp. KSM-635, J Gen Microbiol 136(7), 1327-1334, 1990 Nucleic acid studies on halophilic archaebacteria, J Gen Microbiol 131, 165-173, 1985 Oren A, A thermophilic amyloglucosidase from Halobacterium sodomense, a halophilic bacterium from the Dead Sea Curr Microbiol 8, 225-230, 1983 Partial sequence of the gene for a serine protease from a halophilic archaeum Haloferax mediterranei R4, and nucleotide sequences of 16S rRNA encoding genes from severalhalophilic archaea, Experientia 49, 503-513, 1993 Survey of antimicrophilic susceptibility of moderately halophilic eubacteria and extremely halophilic aerobic archaeobacteria: utilization of antimicrobial resistance as a genetic marker, Syst Appl Microbiol 16, 352-360, 1993 Taxonomy of the family Halobacteriaceae and the description of two new genera Halorubrobacterium and Natrialba, J Gen Appl Microbiol 41, 333-350, 1995 The glycolipid of Halobacterium sodomense, J Gen Microbiol 136, 2327-2331, 1990 Tranfer of Halobacterium saccharovorum, Halobacterium sodomense, Halobacterium trapanicum NRC 34041 and Halobacterium lacusprofundi to the genus Halorubrum gen. nov., as Halorubrum saccharovorum comb. nov., Halorubrum sodomense comb. nov., Halorubrum trapanicum comb. nov., Halorubrum lacusprofundi comb. nov, Syst Appl Microbiol 18, 237-243, 1995 Transfer of Halobacterium saccharovorum, Halobacterium sodomense, Halobacterium trapanicum NRC 34021 and Halobacterium lacusprofundi to the genus Halorubrum gen, nov, as Halorubrum saccharovorum combnov, Halorubrum sodomense combnov, Halorubrum trapanicum combnov, and Halorubrum lacusprofundi combnov Syst Appl Microbiol 18, 237-243, 1995 Validation of the publication of new names and new combinations previously effectively published outside the IJSB. No. 56, Int J Syst Bacteriol 46, 362-363, 1996 |