| NCIMB number | NCIMB 12084 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Nocardia otitidiscaviarum |
| Preservation method | Unknown |
| Price band | A |
| Media | 002 |
| Gas regime | aerobic |
| ACDP category | 2 |
| Hazard information | This species can be an opportunist pathogen. It has been associated with pulmonary neural and/or systematic nocardiosis, mycetomas and localised cutaneous and subcutaneous infections. |
| Additional hazard information | Ref: Manual Clinical Microbiology ASM 1995, 6th edition, P R Murray et al |
| Colony Edge | Entire |
| Colony Surface | Dry/Flaky Matte |
| Colony Shape | Irregular |
| Colony Elevation | Convex/Pulvinate |
| Colony Colour | Buff-Yellow |
| Colony Opacity | Opaque |
| Cellular Shape | Slender Irregular Rods |
| Cellular Size | medium |
| Cellular Arrangement | Single |
| Gram stain | Gram Positive |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | Infected middle ear of guinea pig |
| Isolated by | E. Snijders |
| Date of Accession | 03/05/1985 |
| History | R.E.Gordon -- NCTC -- E.Snijders |
| Other collection IDs | ATCC14629 DSM43242 IFO14405 NCTC1934 |
| Yeast? | False |
| K12 | No |
| References | Geneesk Tijdschr. Ned-Ind (1924) 64 Int. Bull. bact. Nomencl. Taxon. (1962) 12 pp191-192 Ann. NY. Acad. Sci. (1962) 98 pp628-636 J. Bact. (1976) 127 pp584-594 IJSEM (2003) 53:30 (Unknown); J Gen Appl Microbiol 36, 309-331, 1990; , (Unknown); Int J Syst Bacteriol 30, 338, 1980; , Approved Lists of Bacterial Names; Int J Syst Bacteriol 30, 225-420, 1980; , Phylogenetic analysis of the genera Rhodococcus and Norcardia and evidence for the evolutionary origin of the genus Nocardia from within the radiation of Rhodococcus species; Microbiology 141, 523-528, 1995; , Sequence-based identification of aerobic actinomycetes; J Clin Microbiol 42(6), 2530-2540, 2004; , Intra- and intergeneric relationships of various actinomycete strains based on the acyl types of the muramyl residue in cell wall peptidoglycans examined in a glycolate test; Int J Syst Bacteriol 47, 182-190, 1997; , Numerical classification of some Rhodococci, Corynebacteria and related organisms; J Gen Microbiol 128(4), 731-745, 1982; , Numerical classification of sporoactinomycetes containing meso-diaminopimelic acid in the cell wall; J Gen Microbiol 128(3), 503-527, 1982; , Phylogenetic analysis of mycolic acid-containing wall-chemotype IV actinomycetes and allied taxa by partial sequencing of ribosomal protein AT-L30; Int J Syst Bacteriol 45(4), 653-660, 1995; , Restriction and modification enzymes and their recognition sequences; Nucleic Acids Res 13 Suppl, r165-r200, 1985; , Ribosomal ribonucleic acid similarities in the classification of Rhodococcus and related taxa; J Gen Microbiol 118(2), 313-319, 1980; , Phylogeny of the genus Nocardia based on reassessed 16S rRNA gene sequences reveals underspeciation and division of strains classified as Nocardia asteroides into three established species and two unnamed taxons; J Clin Microbiol 41(2), 851-856, 2003; , Characterization of Nocardia nova; Int J Syst Bacteriol 40, 170-174, 1990; , Phylogenetic studies of Nocardia species based on gyrB gene analyses; J Med Microbiol 59(2), 165-171, 2010; , A phylogeny of the genus Nocardia deduced from the analysis of small-subunit ribosomal DNA sequences, including transfer of Nocardia amarae to the genus Gordona as Gordona amarae comb. nov; FEMS Microbiol Lett 123(3), 261-267, 1994; , Nocardia caishijiensis sp. nov., a novel soil actinomycete; Int J Syst Evol Microbiol 53(4), 999-1004, 2003; , Nocardia cerradoensis sp. nov., a novel isolate from Cerrado soil in Brazil; Int J Syst Evol Microbiol 53(1), 29-33, 2003; , Use of PCR-Restriction Enzyme Pattern Analysis and Sequencing Database for hsp65 Gene-Based Identification of Nocardia Species; J Clin Microbiol 44(2), 536-546, 2006; , Analysis of secA1 gene sequences for identification of Nocardia species; J Clin Microbiol 44(8), 2760-2766, 2006; , Mycolic acid analysis in Nocardia species. The mycolic acid compositions of Nocardia asteroides, N. farcinica, and N. nova; J Microbiol Methods 37(2), 111-122, 1999; , Nocardia puris sp. nov; Int J Syst Evol Microbiol 53(5), 1595-1599, 2003; , Novel method for rapid identification of Nocardia species by detection of preformed enzymes; J Clin Microbiol 34(1), 103-107, 1996; , Numerical classification of some named strains of Nocardia asteroides and related isolates from soil; J Gen Microbiol 118(2), 295-312, 1980; , Phylogeny and identification of Nocardia species on the basis of multilocus sequence analysis; J Clin Microbiol 48(12), 4525-4533, 2010; , Structural determination of a new naturally occurring cyclic vitamin K; Biochem Biophys Res Commun 140(3), 916-923, 1986; , |
| NCIMB number | NCIMB 12084 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Nocardia otitidiscaviarum |
| Preservation method | Unknown |
| Price band | A |
| Media | 002 |
| Gas regime | aerobic |
| ACDP category | 2 |
| Hazard information | This species can be an opportunist pathogen. It has been associated with pulmonary neural and/or systematic nocardiosis, mycetomas and localised cutaneous and subcutaneous infections. |
| Additional hazard information | Ref: Manual Clinical Microbiology ASM 1995, 6th edition, P R Murray et al |
| Colony Edge | Entire |
| Colony Surface | Dry/Flaky Matte |
| Colony Shape | Irregular |
| Colony Elevation | Convex/Pulvinate |
| Colony Colour | Buff-Yellow |
| Colony Opacity | Opaque |
| Cellular Shape | Slender Irregular Rods |
| Cellular Size | medium |
| Cellular Arrangement | Single |
| Gram stain | Gram Positive |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | Infected middle ear of guinea pig |
| Isolated by | E. Snijders |
| Date of Accession | 03/05/1985 |
| History | R.E.Gordon -- NCTC -- E.Snijders |
| Other collection IDs | ATCC14629 DSM43242 IFO14405 NCTC1934 |
| Yeast? | False |
| K12 | No |
| References | Geneesk Tijdschr. Ned-Ind (1924) 64 Int. Bull. bact. Nomencl. Taxon. (1962) 12 pp191-192 Ann. NY. Acad. Sci. (1962) 98 pp628-636 J. Bact. (1976) 127 pp584-594 IJSEM (2003) 53:30 (Unknown); J Gen Appl Microbiol 36, 309-331, 1990; , (Unknown); Int J Syst Bacteriol 30, 338, 1980; , Approved Lists of Bacterial Names; Int J Syst Bacteriol 30, 225-420, 1980; , Phylogenetic analysis of the genera Rhodococcus and Norcardia and evidence for the evolutionary origin of the genus Nocardia from within the radiation of Rhodococcus species; Microbiology 141, 523-528, 1995; , Sequence-based identification of aerobic actinomycetes; J Clin Microbiol 42(6), 2530-2540, 2004; , Intra- and intergeneric relationships of various actinomycete strains based on the acyl types of the muramyl residue in cell wall peptidoglycans examined in a glycolate test; Int J Syst Bacteriol 47, 182-190, 1997; , Numerical classification of some Rhodococci, Corynebacteria and related organisms; J Gen Microbiol 128(4), 731-745, 1982; , Numerical classification of sporoactinomycetes containing meso-diaminopimelic acid in the cell wall; J Gen Microbiol 128(3), 503-527, 1982; , Phylogenetic analysis of mycolic acid-containing wall-chemotype IV actinomycetes and allied taxa by partial sequencing of ribosomal protein AT-L30; Int J Syst Bacteriol 45(4), 653-660, 1995; , Restriction and modification enzymes and their recognition sequences; Nucleic Acids Res 13 Suppl, r165-r200, 1985; , Ribosomal ribonucleic acid similarities in the classification of Rhodococcus and related taxa; J Gen Microbiol 118(2), 313-319, 1980; , Phylogeny of the genus Nocardia based on reassessed 16S rRNA gene sequences reveals underspeciation and division of strains classified as Nocardia asteroides into three established species and two unnamed taxons; J Clin Microbiol 41(2), 851-856, 2003; , Characterization of Nocardia nova; Int J Syst Bacteriol 40, 170-174, 1990; , Phylogenetic studies of Nocardia species based on gyrB gene analyses; J Med Microbiol 59(2), 165-171, 2010; , A phylogeny of the genus Nocardia deduced from the analysis of small-subunit ribosomal DNA sequences, including transfer of Nocardia amarae to the genus Gordona as Gordona amarae comb. nov; FEMS Microbiol Lett 123(3), 261-267, 1994; , Nocardia caishijiensis sp. nov., a novel soil actinomycete; Int J Syst Evol Microbiol 53(4), 999-1004, 2003; , Nocardia cerradoensis sp. nov., a novel isolate from Cerrado soil in Brazil; Int J Syst Evol Microbiol 53(1), 29-33, 2003; , Use of PCR-Restriction Enzyme Pattern Analysis and Sequencing Database for hsp65 Gene-Based Identification of Nocardia Species; J Clin Microbiol 44(2), 536-546, 2006; , Analysis of secA1 gene sequences for identification of Nocardia species; J Clin Microbiol 44(8), 2760-2766, 2006; , Mycolic acid analysis in Nocardia species. The mycolic acid compositions of Nocardia asteroides, N. farcinica, and N. nova; J Microbiol Methods 37(2), 111-122, 1999; , Nocardia puris sp. nov; Int J Syst Evol Microbiol 53(5), 1595-1599, 2003; , Novel method for rapid identification of Nocardia species by detection of preformed enzymes; J Clin Microbiol 34(1), 103-107, 1996; , Numerical classification of some named strains of Nocardia asteroides and related isolates from soil; J Gen Microbiol 118(2), 295-312, 1980; , Phylogeny and identification of Nocardia species on the basis of multilocus sequence analysis; J Clin Microbiol 48(12), 4525-4533, 2010; , Structural determination of a new naturally occurring cyclic vitamin K; Biochem Biophys Res Commun 140(3), 916-923, 1986; , |