NCIMB 13217
NCIMB 13217
规格:
货期:
编号:TS387530
品牌:Testobio
| NCIMB number | NCIMB 13217 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Paracoccus pantotrophus |
| Depositor designation | GB17 |
| Preservation method | Lyophilised |
| Preserved as | Thiosphaera pantotropha |
| Other catalogue information | Formerly type strain of THIOSPHAERA PANTOTROPHA |
| Price band | A |
| Media | 313 |
| Gas regime | aerobic |
| Growth factors (and/or information) | Colony morphology above relates to growth on lab 8 at 1 day. |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Shiny |
| Colony Shape | Circular |
| Colony Elevation | Convex |
| Colony Colour | Pale Yellow |
| Colony Opacity | Opaque |
| Cellular Shape | See Other Below |
| Cellular Arrangement | Singly, Pairs, Chain |
| Cellular Motility | See Other |
| Gram stain | Gram Variable |
| Cellular (Other) | Appears To Have A Life Cycle (Observed By Rsp When Grown On Lab 8). Cells Change From Coccobacilli To Motile Rods. Intermediate Stages Also Present. |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | "Waste treatment plant, The Netherlands" |
| Date of Accession | 21/05/1992 |
| History | L.A.Robertson |
| Other collection IDs | ATCC35512 DSM2944 LMD82.5 |
| Yeast? | False |
| K12 | No |
| References | Rainey F A et al IJSB (1999) 49 645-651 A re-evaluation of the taxonomy of Paracoccus denitrificans and a proposal for the combination Paracoccus pantotrophus comb. nov. IJSEM (2003) 53:235 A re-evaluation of the taxonomy of Paracoccus denitrificans and a proposal for the combination Paracoccus pantotrophus comb. nov, Int J Syst Bacteriol 49 Pt 2, 645-651, 1999 Characterization of the paramagnetic iron-containing redox centres of Thiosphaera pantotropha periplasmic nitrate reductase, FEBS Lett 345(1), 76-80, 1994 Cloning and characterization of sulfite dehydrogenase, two c-type cytochromes, and a flavoprotein of Paracoccus denitrificans GB17: essential role of sulfite dehydrogenase in lithotrophic sulfur oxidation, J Bacteriol 179(16), 5014-5023, 1997 d(1) haem biogenesis - assessing the roles of three nir gene products, FEBS J 276(21), 6399-6411, 2009 Identification and sequence analysis of the soxB gene essential for sulfur oxidation of Paracoccus denitrificans GB17, J Bacteriol 176(20), 6188-6191, 1994 Identification of ccdA in Paracoccus pantotrophus GB17: disruption of ccdA causes complete deficiency in c-type cytochromes, J Bacteriol 183(1), 257-263, 2001 Insertion of transposon Tn5 into a structural gene of the membrane-bound nitrate reductase of Thiosphaera pantotropha results in anaerobic overexpression of periplasmic nitrate reductase activity, J Gen Microbiol 139(12), 3205-3214, 1993 Insights into the Transposable Mobilome of Paracoccus spp. (Alphaproteobacteria), PLoS One 7(2), e32277, 2012 Molecular hijacking of siroheme for the synthesis of heme and d1 heme, Proc Natl Acad Sci U S A 108(45), 18260-18265, 2011 NirF is a periplasmic protein that binds d heme as part of its essential role in d heme biogenesis, FEBS J 277(23), 4944-4955, 2010 Purification and characterization of the periplasmic nitrate reductase from Thiosphaera pantotropha, Eur J Biochem 220(1), 117-124, 1994 Sequence analysis of subunits of the membrane-bound nitrate reductase from a denitrifying bacterium: the integral membrane subunit provides a prototype for the dihaem electron-carrying arm of a redox loop, Mol Microbiol 15(2), 319-331, 1995 Stable-isotope probing implicates Methylophaga spp and novel Gammaproteobacteria in marine methanol and methylamine metabolism, ISME J 1(6), 480-491, 2007 The complete amino acid sequence confirms the presence of pseudoazurin in Thiosphaera pantotropha, Biochem J 308 ( Pt 2), 585-590, 1995 The influence of carbon substrate on the activity of the periplasmic nitrate reductase in aerobically grown Thiosphaera pantotropha, Arch Microbiol 157, 535-537, 1992 The napEDABC gene cluster encoding the periplasmic nitrate reductase system of Thiosphaera pantotropha, Biochem J 309 ( Pt 3), 983-992, 1995 The pseudoazurin gene from Thiosphaera pantotropha: analysis of upstream putative regulatory sequences and overexpression in Escherichia coli, Biochem J 321 ( Pt 3), 699-705, 1997 The quantitative measurement of DNA hybridization from renaturation rates, Eur J Biochem 12, 133-142, 1970 The relationship of nitrate reducing bacteria on the basis of narH gene sequences and comparison of narH and 16S rDNA based phylogeny, Syst Appl Microbiol 23(1), 47-57, 2000 Thiosphaera pantotropha gen. nov., sp. nov., a facultatively anaerobic, facultatively autotrophic sulfur bacterium, J Gen Microbiol 129, 2847-2855, 1983 Transfer of Thiosphaera pantotropha to Paracoccus denitrificans, Int J Syst Bacteriol 43(2), 363-367, 1993 Validation of the publication of new names and new combinations previously effectively published outside the lJSB. List No. 13, Int J Syst Bacteriol 34, 91-92, 1984 |
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| NCIMB number | NCIMB 13217 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Paracoccus pantotrophus |
| Depositor designation | GB17 |
| Preservation method | Lyophilised |
| Preserved as | Thiosphaera pantotropha |
| Other catalogue information | Formerly type strain of THIOSPHAERA PANTOTROPHA |
| Price band | A |
| Media | 313 |
| Gas regime | aerobic |
| Growth factors (and/or information) | Colony morphology above relates to growth on lab 8 at 1 day. |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Shiny |
| Colony Shape | Circular |
| Colony Elevation | Convex |
| Colony Colour | Pale Yellow |
| Colony Opacity | Opaque |
| Cellular Shape | See Other Below |
| Cellular Arrangement | Singly, Pairs, Chain |
| Cellular Motility | See Other |
| Gram stain | Gram Variable |
| Cellular (Other) | Appears To Have A Life Cycle (Observed By Rsp When Grown On Lab 8). Cells Change From Coccobacilli To Motile Rods. Intermediate Stages Also Present. |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | "Waste treatment plant, The Netherlands" |
| Date of Accession | 21/05/1992 |
| History | L.A.Robertson |
| Other collection IDs | ATCC35512 DSM2944 LMD82.5 |
| Yeast? | False |
| K12 | No |
| References | Rainey F A et al IJSB (1999) 49 645-651 A re-evaluation of the taxonomy of Paracoccus denitrificans and a proposal for the combination Paracoccus pantotrophus comb. nov. IJSEM (2003) 53:235 A re-evaluation of the taxonomy of Paracoccus denitrificans and a proposal for the combination Paracoccus pantotrophus comb. nov, Int J Syst Bacteriol 49 Pt 2, 645-651, 1999 Characterization of the paramagnetic iron-containing redox centres of Thiosphaera pantotropha periplasmic nitrate reductase, FEBS Lett 345(1), 76-80, 1994 Cloning and characterization of sulfite dehydrogenase, two c-type cytochromes, and a flavoprotein of Paracoccus denitrificans GB17: essential role of sulfite dehydrogenase in lithotrophic sulfur oxidation, J Bacteriol 179(16), 5014-5023, 1997 d(1) haem biogenesis - assessing the roles of three nir gene products, FEBS J 276(21), 6399-6411, 2009 Identification and sequence analysis of the soxB gene essential for sulfur oxidation of Paracoccus denitrificans GB17, J Bacteriol 176(20), 6188-6191, 1994 Identification of ccdA in Paracoccus pantotrophus GB17: disruption of ccdA causes complete deficiency in c-type cytochromes, J Bacteriol 183(1), 257-263, 2001 Insertion of transposon Tn5 into a structural gene of the membrane-bound nitrate reductase of Thiosphaera pantotropha results in anaerobic overexpression of periplasmic nitrate reductase activity, J Gen Microbiol 139(12), 3205-3214, 1993 Insights into the Transposable Mobilome of Paracoccus spp. (Alphaproteobacteria), PLoS One 7(2), e32277, 2012 Molecular hijacking of siroheme for the synthesis of heme and d1 heme, Proc Natl Acad Sci U S A 108(45), 18260-18265, 2011 NirF is a periplasmic protein that binds d heme as part of its essential role in d heme biogenesis, FEBS J 277(23), 4944-4955, 2010 Purification and characterization of the periplasmic nitrate reductase from Thiosphaera pantotropha, Eur J Biochem 220(1), 117-124, 1994 Sequence analysis of subunits of the membrane-bound nitrate reductase from a denitrifying bacterium: the integral membrane subunit provides a prototype for the dihaem electron-carrying arm of a redox loop, Mol Microbiol 15(2), 319-331, 1995 Stable-isotope probing implicates Methylophaga spp and novel Gammaproteobacteria in marine methanol and methylamine metabolism, ISME J 1(6), 480-491, 2007 The complete amino acid sequence confirms the presence of pseudoazurin in Thiosphaera pantotropha, Biochem J 308 ( Pt 2), 585-590, 1995 The influence of carbon substrate on the activity of the periplasmic nitrate reductase in aerobically grown Thiosphaera pantotropha, Arch Microbiol 157, 535-537, 1992 The napEDABC gene cluster encoding the periplasmic nitrate reductase system of Thiosphaera pantotropha, Biochem J 309 ( Pt 3), 983-992, 1995 The pseudoazurin gene from Thiosphaera pantotropha: analysis of upstream putative regulatory sequences and overexpression in Escherichia coli, Biochem J 321 ( Pt 3), 699-705, 1997 The quantitative measurement of DNA hybridization from renaturation rates, Eur J Biochem 12, 133-142, 1970 The relationship of nitrate reducing bacteria on the basis of narH gene sequences and comparison of narH and 16S rDNA based phylogeny, Syst Appl Microbiol 23(1), 47-57, 2000 Thiosphaera pantotropha gen. nov., sp. nov., a facultatively anaerobic, facultatively autotrophic sulfur bacterium, J Gen Microbiol 129, 2847-2855, 1983 Transfer of Thiosphaera pantotropha to Paracoccus denitrificans, Int J Syst Bacteriol 43(2), 363-367, 1993 Validation of the publication of new names and new combinations previously effectively published outside the lJSB. List No. 13, Int J Syst Bacteriol 34, 91-92, 1984 |
