| NCIMB number | NCIMB 2193 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Photobacterium leiognathi |
| Depositor designation | L1 |
| Preservation method | Lyophilised |
| Other catalogue information | Luminous |
| Price band | A |
| Media | 209210 |
| Gas regime | aerobic |
| Growth factors (and/or information) | SW, 25C, 3d: good growth, translucent with opaque patches |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth/Shiny |
| Colony Shape | Circular |
| Colony Elevation | Convex |
| Colony Colour | Off White |
| Cellular Shape | Rod |
| Cellular Size | short to medium |
| Cellular Arrangement | Singly |
| Cellular Motility | Yes |
| Gram stain | Gram Negative |
| Cellular (Other) | Convex Sides, Rounded Ends, Slightly Bloated And Pleomorphic. |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | Light organ of teleostean fish in the family Leiognathidae |
| Date of Accession | 05/05/1983 |
| History | H.Boisvert |
| Other collection IDs | ATCC25521 CIP665 |
| Yeast? | False |
| K12 | No |
| References | Biochemical and Biophysical Research Communications 1998, vol 244, no 3, pp. 838-842 Int J Syst Evol Microbiol, Jun 2009; 59: 1438 - 1442. (Unknown), Ann Microbiol (Paris) 112, 520, 1967 (Unknown), Int J Syst Bacteriol 25, 208, 1975 Approved Lists of Bacterial Names, Int J Syst Bacteriol 30, 225-420, 1980 Photobacterium kishitanii sp. nov., a luminous marine bacterium symbiotic with deep-sea fishes, Int J Syst Evol Microbiol 57(9), 2073-2078, 2007 Phylogenetic analysis and assessment of the genera Vibrio, Photobacterium, Aeromonas, and Plesiomonas deduced from small-subunit rRNA sequences, Int J Syst Bacteriol 44(3), 416-426, 1994 Phylogenetic relationships of marine bacteria, mainly members of the family Vibrionaceae, determined on the basis of 16S rRNA sequences, Int J Syst Bacteriol 43(1), 8-19, 1993 Phylogeny and molecular identification of vibrios on the basis of multilocus sequence analysis, Appl Environ Microbiol 71(9), 5107-5115, 2005 Reclassification of Vibrio fischeri, Vibrio logei, Vibrio salmonicida and Vibrio wodanis as Aliivibrio fischeri gen. nov., comb. nov., Aliivibrio logei comb. nov., Aliivibrio salmonicida comb. nov. and Aliivibrio wodanis comb. nov, Int J Syst Evol Microbiol 57(12), 2823-2829, 2007 Use of recA as an alternative phylogenetic marker in the family Vibrionaceae, Int J Syst Evol Microbiol 54(3), 919-924, 2004 [Study on a Photobacterium isolated from the light organ of the Leiognathidae fish], Ann Inst Pasteur (Paris) 112(4), 521-525, 1967 Bacteriocuprein superoxide dismutase of Photobacterium leiognathi. Isolation and sequence of the gene and evidence for a precursor form, J Biol Chem 262(4), 1882-1887, 1987 Characteristics analysis of the luzA gene encoding chaperone from Photobacterium leiognathi related to bioluminescence, Biochem Biophys Res Commun 244(3), 838-842, 1998 Natural merodiploidy of the lux-rib operon of Photobacterium leiognathi from coastal waters of Honshu, Japan, J Bacteriol 189(17), 6148-6158, 2007 Photobacterium histaminum sp. nov., a histamine-producing marine bacterium, Int J Syst Bacteriol 44, 631-636, 1994 Phylogenetic analysis of host-symbiont specificity and codivergence in bioluminescent symbioses, Cladistics 23(5), 507-532, 2007 Phylogenetic analysis of the lux operon distinguishes two evolutionarily distinct clades of Photobacterium leiognathi, Arch Microbiol 181(5), 15034641, 2004 Phylogeny of the Vibrionaceae, and recommendation for two new genera, Listonella and Shewanella, Syst Appl Microbiol 6, 171-182, 1985 The lux genes in Photobacterium leiognathi are closely linked with genes corresponding in sequence to riboflavin synthesis genes, Biochem Biophys Res Commun 186(2), 690-697, 1992 The lux genes of the luminous bacterial symbiont, Photobacterium leiognathi, of the ponyfish. Nucleotide sequence, difference in gene organization, and high expression in mutant Escherichia coli, Eur J Biochem 201(1), 161-167, 1991 The nucleotide sequence of a small metT tRNA operon from Photobacterium leiognathi, Nucleic Acids Res 18(12), 3662, 1990 The pkI gene encoding pyruvate kinase I links to the luxZ gene which enhances bioluminescence of the lux operon from Photobacterium leiognathi, Biochem Biophys Res Commun 239(1), 228-234, 1997 The uncultured luminous symbiont of Anomalops katoptron (Beryciformes: Anomalopidae) represents a new bacterial genus, Mol Phylogenet Evol , 2011 |
| PubMed Publication | https://www.ncbi.nlm.nih.gov/m/pubmed/10229952https://www.ncbi.nlm.nih.gov/m/pubmed/9535753 |
| NCIMB number | NCIMB 2193 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Photobacterium leiognathi |
| Depositor designation | L1 |
| Preservation method | Lyophilised |
| Other catalogue information | Luminous |
| Price band | A |
| Media | 209210 |
| Gas regime | aerobic |
| Growth factors (and/or information) | SW, 25C, 3d: good growth, translucent with opaque patches |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth/Shiny |
| Colony Shape | Circular |
| Colony Elevation | Convex |
| Colony Colour | Off White |
| Cellular Shape | Rod |
| Cellular Size | short to medium |
| Cellular Arrangement | Singly |
| Cellular Motility | Yes |
| Gram stain | Gram Negative |
| Cellular (Other) | Convex Sides, Rounded Ends, Slightly Bloated And Pleomorphic. |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | Light organ of teleostean fish in the family Leiognathidae |
| Date of Accession | 05/05/1983 |
| History | H.Boisvert |
| Other collection IDs | ATCC25521 CIP665 |
| Yeast? | False |
| K12 | No |
| References | Biochemical and Biophysical Research Communications 1998, vol 244, no 3, pp. 838-842 Int J Syst Evol Microbiol, Jun 2009; 59: 1438 - 1442. (Unknown), Ann Microbiol (Paris) 112, 520, 1967 (Unknown), Int J Syst Bacteriol 25, 208, 1975 Approved Lists of Bacterial Names, Int J Syst Bacteriol 30, 225-420, 1980 Photobacterium kishitanii sp. nov., a luminous marine bacterium symbiotic with deep-sea fishes, Int J Syst Evol Microbiol 57(9), 2073-2078, 2007 Phylogenetic analysis and assessment of the genera Vibrio, Photobacterium, Aeromonas, and Plesiomonas deduced from small-subunit rRNA sequences, Int J Syst Bacteriol 44(3), 416-426, 1994 Phylogenetic relationships of marine bacteria, mainly members of the family Vibrionaceae, determined on the basis of 16S rRNA sequences, Int J Syst Bacteriol 43(1), 8-19, 1993 Phylogeny and molecular identification of vibrios on the basis of multilocus sequence analysis, Appl Environ Microbiol 71(9), 5107-5115, 2005 Reclassification of Vibrio fischeri, Vibrio logei, Vibrio salmonicida and Vibrio wodanis as Aliivibrio fischeri gen. nov., comb. nov., Aliivibrio logei comb. nov., Aliivibrio salmonicida comb. nov. and Aliivibrio wodanis comb. nov, Int J Syst Evol Microbiol 57(12), 2823-2829, 2007 Use of recA as an alternative phylogenetic marker in the family Vibrionaceae, Int J Syst Evol Microbiol 54(3), 919-924, 2004 [Study on a Photobacterium isolated from the light organ of the Leiognathidae fish], Ann Inst Pasteur (Paris) 112(4), 521-525, 1967 Bacteriocuprein superoxide dismutase of Photobacterium leiognathi. Isolation and sequence of the gene and evidence for a precursor form, J Biol Chem 262(4), 1882-1887, 1987 Characteristics analysis of the luzA gene encoding chaperone from Photobacterium leiognathi related to bioluminescence, Biochem Biophys Res Commun 244(3), 838-842, 1998 Natural merodiploidy of the lux-rib operon of Photobacterium leiognathi from coastal waters of Honshu, Japan, J Bacteriol 189(17), 6148-6158, 2007 Photobacterium histaminum sp. nov., a histamine-producing marine bacterium, Int J Syst Bacteriol 44, 631-636, 1994 Phylogenetic analysis of host-symbiont specificity and codivergence in bioluminescent symbioses, Cladistics 23(5), 507-532, 2007 Phylogenetic analysis of the lux operon distinguishes two evolutionarily distinct clades of Photobacterium leiognathi, Arch Microbiol 181(5), 15034641, 2004 Phylogeny of the Vibrionaceae, and recommendation for two new genera, Listonella and Shewanella, Syst Appl Microbiol 6, 171-182, 1985 The lux genes in Photobacterium leiognathi are closely linked with genes corresponding in sequence to riboflavin synthesis genes, Biochem Biophys Res Commun 186(2), 690-697, 1992 The lux genes of the luminous bacterial symbiont, Photobacterium leiognathi, of the ponyfish. Nucleotide sequence, difference in gene organization, and high expression in mutant Escherichia coli, Eur J Biochem 201(1), 161-167, 1991 The nucleotide sequence of a small metT tRNA operon from Photobacterium leiognathi, Nucleic Acids Res 18(12), 3662, 1990 The pkI gene encoding pyruvate kinase I links to the luxZ gene which enhances bioluminescence of the lux operon from Photobacterium leiognathi, Biochem Biophys Res Commun 239(1), 228-234, 1997 The uncultured luminous symbiont of Anomalops katoptron (Beryciformes: Anomalopidae) represents a new bacterial genus, Mol Phylogenet Evol , 2011 |
| PubMed Publication | https://www.ncbi.nlm.nih.gov/m/pubmed/10229952https://www.ncbi.nlm.nih.gov/m/pubmed/9535753 |