| NCIMB number | NCIMB 9392 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Pseudomonas chlororaphis subsp.chlororaphis |
| Depositor designation | Stanier30 |
| Preservation method | Lyophilised |
| Price band | A |
| Media | 001 |
| Gas regime | aerobic |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth, Shiny |
| Colony Shape | Circular |
| Colony Elevation | Low Convex |
| Colony Colour | Off White |
| Colony Opacity | Translucent |
| Cellular Shape | Rod |
| Cellular Size | short |
| Cellular Motility | Yes |
| Gram stain | Gram Negative |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | Plate contaminant |
| Date of Accession | 22/05/1962 |
| History | NRRL -- W.Schmidt |
| Other collection IDs | ATCC9446 BUCSAV286 CCEB292 CCM1975 CIP63.22 DSM50083 IAM1511 IAM12354 IFO3904 IMET10404 JCM2778 NCTC7357 NRRLB-560 |
| Yeast? | False |
| K12 | No |
| References | Colwell R.R. and Mandel M.(1964) J. Bact. 87 p1412 Levitch M.E. (1970) J. Bact. 103 p16 IJSB (1989) 39 (3) 230-235 IJSEM (2002) 52:513-523 IJSEM (2002) 52:1500 IJSEM (2002) 52:1501 Approved Lists of Bacterial Names, Int J Syst Bacteriol 30, 225-420, 1980 American Type Culture Collection, Catalogue of strains I, 15th ed., 1982, American Type Culture Collection , 1982 Freshwater selenium-methylating bacterial thiopurine methyltransferases: diversity and molecular phylogeny, Environ Microbiol 7(2), 153-164, 2005 Evaluation of oprI and oprL genes as molecular markers for the genus Pseudomonas and their use in studying the biodiversity of a small Belgian River, Res Microbiol 164(3), 254-261, 2013 Formation of polyesters consisting of medium-chain-length 3-hydroxyalkanoic acids from gluconate by Pseudomonas aeruginosa and other fluorescent pseudomonads, Appl Environ Microbiol 56, 3360-3367, 1990 Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates, Res Microbiol 156(5-6), 763-773, 2005 The determination and comparison of the 16S rRNA gene sequences of species of the genus Pseudomonas (sensu stricto) and estimation of the natural intrageneric relationships, Syst Appl Microbiol 19, 478-492, 1996 The phylogeny of the genera Chryseomonas, Flavimonas, and Pseudomonas supports synonymy of these three genera, Int J Syst Bacteriol 47(2), 249-251, 1997 Tracking the blue: a MLST approach to characterise the Pseudomonas fluorescens group, Food Microbiol 39, 116-126, 2014 Phylogenetic relationships of Pseudomonas putida strains deduced from the nucleotide sequences of gyrB, rpoD and 16S rRNA genes, Int J Syst Bacteriol 48 Pt 3, 813-819, 1998 Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes, Microbiology 146 ( Pt 10), 2385-2394, 2000 Improved resolution on the phylogenetic relationships among Pseudomonasby the combined analysis of atpD, carA, recA and 16S rDNA, Antonie Van Leeuwenhoek 86(1), 51-64, 2004 Numerical taxonomy of Pseudomonas alcaligenes, P. pseudoalcaligenes, P. mendocina, P. stutzeri, and related bacteria, Int J Syst Bacteriol 39, 135-144, 1989 Diversity and evolution of the phenazine biosynthesis pathway, Appl Environ Microbiol 76(3), 866-879, 2010 pH dependence and thermostability of lipases from cultures from the ARS Culture Collection, J Ind Microbiol 13, 242-248, 1994 Classification of genus Pseudomonas by MALDI-TOF MS based on ribosomal protein coding in S10-spc-alpha operon at strain level, J Proteome Res 9(12), 6722-6728, 2010 The rice inoculant strain Alcaligenes faecalis A15 is a nitrogen-fixing Pseudomonas stutzeri, Syst Appl Microbiol 22(2), 215-224, 1999 Utility of internally transcribed 16S-23S rDNA spacer regions for the definition of Pseudomonas stutzeri genomovars and other Pseudomonas species, Int J Syst Evol Microbiol 50 Pt 4, 1629-1639, 2000 PCR-based preparation of 23S rRNA-targeted group-specific polynucleotide probes, Appl Environ Microbiol 60(9), 3236-3244, 1994 A novel molecular marker for studying phylogeny and diversity of phosphate-solubilizing pseudomonads: the pyrroloquinoline quinone biosynthetic gene pqqC, Appl Environ Microbiol 77(20), 21856827, 2011 Sequence diversity of the OprD protein of environmental Pseudomonas strains, Environ Microbiol 9(3), 824-835, 2007 Application of horizontal staircase electrophoresis in agarose minigels to the random intergenic spacer analysis of clinical samples, Electrophoresis 26(23), 4402-4410, 2005 Estimation of solvent-tolerance of bacteria by the solvent parameter log P, J Ferment Bioeng 71, 194-196, 1991 Pseudomonas chlororaphis subsp. piscium subsp. nov., isolated from fresh-water fish, Int J Syst Evol Microbiol , 2010 Regulation of aromatic amino acid biosynthesis in phenazine-producing strains of Pseudomonas, J Bacteriol 103, 16-19, 1970 |
| PubMed Publication | https://www.ncbi.nlm.nih.gov/m/pubmed/17551044 |
| NCIMB number | NCIMB 9392 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Pseudomonas chlororaphis subsp.chlororaphis |
| Depositor designation | Stanier30 |
| Preservation method | Lyophilised |
| Price band | A |
| Media | 001 |
| Gas regime | aerobic |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth, Shiny |
| Colony Shape | Circular |
| Colony Elevation | Low Convex |
| Colony Colour | Off White |
| Colony Opacity | Translucent |
| Cellular Shape | Rod |
| Cellular Size | short |
| Cellular Motility | Yes |
| Gram stain | Gram Negative |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | Plate contaminant |
| Date of Accession | 22/05/1962 |
| History | NRRL -- W.Schmidt |
| Other collection IDs | ATCC9446 BUCSAV286 CCEB292 CCM1975 CIP63.22 DSM50083 IAM1511 IAM12354 IFO3904 IMET10404 JCM2778 NCTC7357 NRRLB-560 |
| Yeast? | False |
| K12 | No |
| References | Colwell R.R. and Mandel M.(1964) J. Bact. 87 p1412 Levitch M.E. (1970) J. Bact. 103 p16 IJSB (1989) 39 (3) 230-235 IJSEM (2002) 52:513-523 IJSEM (2002) 52:1500 IJSEM (2002) 52:1501 Approved Lists of Bacterial Names, Int J Syst Bacteriol 30, 225-420, 1980 American Type Culture Collection, Catalogue of strains I, 15th ed., 1982, American Type Culture Collection , 1982 Freshwater selenium-methylating bacterial thiopurine methyltransferases: diversity and molecular phylogeny, Environ Microbiol 7(2), 153-164, 2005 Evaluation of oprI and oprL genes as molecular markers for the genus Pseudomonas and their use in studying the biodiversity of a small Belgian River, Res Microbiol 164(3), 254-261, 2013 Formation of polyesters consisting of medium-chain-length 3-hydroxyalkanoic acids from gluconate by Pseudomonas aeruginosa and other fluorescent pseudomonads, Appl Environ Microbiol 56, 3360-3367, 1990 Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates, Res Microbiol 156(5-6), 763-773, 2005 The determination and comparison of the 16S rRNA gene sequences of species of the genus Pseudomonas (sensu stricto) and estimation of the natural intrageneric relationships, Syst Appl Microbiol 19, 478-492, 1996 The phylogeny of the genera Chryseomonas, Flavimonas, and Pseudomonas supports synonymy of these three genera, Int J Syst Bacteriol 47(2), 249-251, 1997 Tracking the blue: a MLST approach to characterise the Pseudomonas fluorescens group, Food Microbiol 39, 116-126, 2014 Phylogenetic relationships of Pseudomonas putida strains deduced from the nucleotide sequences of gyrB, rpoD and 16S rRNA genes, Int J Syst Bacteriol 48 Pt 3, 813-819, 1998 Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes, Microbiology 146 ( Pt 10), 2385-2394, 2000 Improved resolution on the phylogenetic relationships among Pseudomonasby the combined analysis of atpD, carA, recA and 16S rDNA, Antonie Van Leeuwenhoek 86(1), 51-64, 2004 Numerical taxonomy of Pseudomonas alcaligenes, P. pseudoalcaligenes, P. mendocina, P. stutzeri, and related bacteria, Int J Syst Bacteriol 39, 135-144, 1989 Diversity and evolution of the phenazine biosynthesis pathway, Appl Environ Microbiol 76(3), 866-879, 2010 pH dependence and thermostability of lipases from cultures from the ARS Culture Collection, J Ind Microbiol 13, 242-248, 1994 Classification of genus Pseudomonas by MALDI-TOF MS based on ribosomal protein coding in S10-spc-alpha operon at strain level, J Proteome Res 9(12), 6722-6728, 2010 The rice inoculant strain Alcaligenes faecalis A15 is a nitrogen-fixing Pseudomonas stutzeri, Syst Appl Microbiol 22(2), 215-224, 1999 Utility of internally transcribed 16S-23S rDNA spacer regions for the definition of Pseudomonas stutzeri genomovars and other Pseudomonas species, Int J Syst Evol Microbiol 50 Pt 4, 1629-1639, 2000 PCR-based preparation of 23S rRNA-targeted group-specific polynucleotide probes, Appl Environ Microbiol 60(9), 3236-3244, 1994 A novel molecular marker for studying phylogeny and diversity of phosphate-solubilizing pseudomonads: the pyrroloquinoline quinone biosynthetic gene pqqC, Appl Environ Microbiol 77(20), 21856827, 2011 Sequence diversity of the OprD protein of environmental Pseudomonas strains, Environ Microbiol 9(3), 824-835, 2007 Application of horizontal staircase electrophoresis in agarose minigels to the random intergenic spacer analysis of clinical samples, Electrophoresis 26(23), 4402-4410, 2005 Estimation of solvent-tolerance of bacteria by the solvent parameter log P, J Ferment Bioeng 71, 194-196, 1991 Pseudomonas chlororaphis subsp. piscium subsp. nov., isolated from fresh-water fish, Int J Syst Evol Microbiol , 2010 Regulation of aromatic amino acid biosynthesis in phenazine-producing strains of Pseudomonas, J Bacteriol 103, 16-19, 1970 |
| PubMed Publication | https://www.ncbi.nlm.nih.gov/m/pubmed/17551044 |