NCIMB 9494
NCIMB 9494
规格:
货期:
编号:TS388035
品牌:Testobio
| NCIMB number | NCIMB 9494 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Pseudomonas putida |
| Depositor designation | A3.12 Stanier90 |
| Preservation method | Lyophilised |
| Preserved as | Pseudomonas fluorescens |
| Other catalogue information | Phage host. Host for BDELLOVIBRIO STARRII NCIMB 9561 |
| Price band | A |
| Media | 001 |
| Gas regime | aerobic |
| Growth factors (and/or information) | Lemco agar, pH7.3, 20C, 3d: good growth |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth/Shiny |
| Colony Shape | Circular |
| Colony Elevation | Convex |
| Colony Colour | Off White |
| Colony Opacity | Translucent |
| Cellular Shape | Rod |
| Cellular Size | short |
| Cellular Arrangement | Singly/Pairs |
| Cellular Motility | Yes |
| Gram stain | Gram Negative |
| Gram Stain Photo | NCIMB 9494.jpg |
| Cellular (Other) | 2D: Straight Axis, Parallel Sides, Rounded Ends |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | Soil |
| Isolated by | R.Y.Stanier |
| Date of Isolation | 01/01/1946 |
| Date of Accession | 23/12/1963 |
| History | A.B.Pardee -- R.Y.Stanier |
| Other collection IDs | ATCC12633 BS2 CECT324 CIP52.191 DSM291 ICPB2693 IAM1236 IFO14164 NCIMB9528 NCTC10936 |
| Yeast? | False |
| K12 | No |
| References | Stanier R.Y. (1947) J. Bact. 54 p339 Stanier R.Y. (1948) J. Bact. 55 p477 Entner N. and Stanier R.Y. (1951) J. Bact. 62 p181 Barrett J.T. et al (1953) J. Bact. 65 p187 Gunter S.E. (1953) J. Bact. 66 p341 Gunsalus I.C. et al (1953) J. Bact. 66 p538 Stanier R.Y. et al (1953) J. Bact. 66 p543 Gunsalus C.F. et al (1953) J. Bact. 66 p548 Barrett J.T. and Kallio R.E. (1953) J. Bact. 66 p517 Wood W.A. and Schwerdt R.F. (1953) J. biol. Chem. 201 p501 Wood W.A. and Schwerdt R.F. (1954) J. biol. Chem. 206 p625 Kovachevich R. and Wood W.A. (1955) J. biol. Chem. 213 p745 Kovachevich R. and Wood W.A. (1955) J. biol. Chem. 213 p757 Narrod S.A. and Wood W.A. (1956) J. biol. Chem. 220 p45 Casida L.E. (1960) J. Bact. 80 p237 Frampton E.W. and Wood W.A. (1961) J. biol. Chem. 236 p2571 Cain R.B. et al (1961) Biochem. J. 79 p312 Gronlund A.F. and Campbell J.J.R. (1961) J. Bact. 81 p721 Liston J. et al (1963) J. Bact. 85 p1061 Colwell R.R. and Mandel M. (1964) J. Bact. 87 p1412 Jacoby G.A. (1964) Biochem. J. 92 pp1-8 Arthur R.M. (1964) Appl. Microbiol. 12 p289 George D.J. and Philips A.T. (1970). J. biol. Chem. 245(3) pp528-537. Identification of alpha ketobutyrate as the prosthetic group of urocanase from Pseudomonas putida. Hosokawa K. (1970) J. biol. Chem. 245(20) p5304. Regulation of synthesis of early enzymes of p-hydroxybenzoate pathway in Pseudomonas putida. Johnson J.C. et al (1971) J. biol. Chem. 246(5) p1222. Deoxyribonucleic acid dependent ribonucleic acid polymerase of Pseudomonas putida. Robertson D.C. (1971) J. biol. Chem. 246(7) p2084.Structure of 2-keto-3-deoxy-6 phosphogluconate aldolase. Higgins S.J. and Mandestan V.J. (1972) Biochem J. 126 p901 Wheews M.L. and Ornston L.N. (1972) J. Bact. 109 pp790-795 Wu C.H. et al (1972) J. Bact. 109 p796 McCarthy D.H. (1975) J. gen. Microbiol. 86(1) - (misquoted as NCTC 9494) Forster, S., Snape, J. R., Lappin-Scott, H. M., Porter, J. (2002) Simultaneous fluorescent gram staining and activity assessment of activated sludge bacteria. Appl. Environ. Microbiol. 68(10), 4772-4779. IJSEM (2002) 52:513-523 IJSEM (2002) 52:1500 IJSEM (2002) 52:1501 IJSEM (2003) 53:56 The tmRNA website: reductive evolution of tmRNA in plastids and other endosymbionts, Nucleic Acids Res 32(Databaseissue), D104-D108, 2004 cpnDB: a chaperonin sequence database, Genome Res 14(8), 1669-1675, 2004 Accumulation of poly(3-hydroxybutyrate) from octanoate in different pseudomonas belonging to the rRNA homology group I, Syst Appl Microbiol 25(2), 183-188, 2002 Evaluation of oprI and oprL genes as molecular markers for the genus Pseudomonas and their use in studying the biodiversity of a small Belgian River, Res Microbiol 164(3), 254-261, 2013 Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates, Res Microbiol 156(5-6), 763-773, 2005 Isolation and characterization of 23 carbofuran-degrading bacteria from soils from distant geographical areas, Lett Appl Microbiol 31(5), 353-358, 2000 cumA multicopper oxidase genes from diverse Mn(II)-oxidizing and non-Mn(II)-oxidizing Pseudomonas strains, Appl Environ Microbiol 67(9), 4272-4278, 2001 Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes, Microbiology 146 ( Pt 10), 2385-2394, 2000 Improved resolution on the phylogenetic relationships among Pseudomonasby the combined analysis of atpD, carA, recA and 16S rDNA, Antonie Van Leeuwenhoek 86(1), 51-64, 2004 Classification of genus Pseudomonas by MALDI-TOF MS based on ribosomal protein coding in S10-spc-alpha operon at strain level, J Proteome Res 9(12), 6722-6728, 2010 The rice inoculant strain Alcaligenes faecalis A15 is a nitrogen-fixing Pseudomonas stutzeri, Syst Appl Microbiol 22(2), 215-224, 1999 Arthrobacter siderocapsulatus Dubinina and Zhdanov 1975AL is a later subjective synonym of Pseudomonas putida (Trevisan 1889) Migula 1895AL, Int J Syst Evol Microbiol 51(1), 169-170, 2001 A novel molecular marker for studying phylogeny and diversity of phosphate-solubilizing pseudomonads: the pyrroloquinoline quinone biosynthetic gene pqqC, Appl Environ Microbiol 77(20), 21856827, 2011 Extracellular polymeric substances (EPS) producing bacterial strains of municipal wastewater sludge: isolation, molecular identification, EPS characterization and performance for sludge settling and dewatering, Water Res 44(7), 2253-2266, 2010 Flavobacterium limicola sp. nov., a psychrophilic, organic-polymer-degrading bacterium isolated from freshwater sediments, Int J Syst Evol Microbiol 53(2), 519-526, 2003 Identification and characterization of a mandelamide hydrolase and an NAD(P)+-dependent benzaldehyde dehydrogenase from Pseudomonas putida ATCC 12633, J Bacteriol 185(8), 2451-2456, 2003 Identification of novel benzoylformate decarboxylases by growth selection., Appl Environ Microbiol 72(12), 7510-7517, 2006 Identification, Cloning and Biochemical Characterization of Pseudomonas putida A (ATCC 12633) Monooxygenase Enzyme necessary for the Metabolism of Tetradecyltrimethylammonium Bromide, Appl Biochem Biotechnol 173(2), 552-561, 2014 Notification that new names and new combinations have appeared in volume 51, part 1, of the IJSEM, Int J Syst Evol Microbiol 51(2), 269, 2001 Recharacterization of Pseudomonas fulva Iizuka and Komagata 1963, and proposals of Pseudomonas parafulva sp. nov. and Pseudomonas cremoricolorata sp. nov, J Gen Appl Microbiol 47(5), 247-261, 2001 Sequence diversity of the OprD protein of environmental Pseudomonas strains, Environ Microbiol 9(3), 824-835, 2007 The Complete Genome Sequence of Pseudomonas putida NBRC 14164T Confirms High Intraspecies Variation, Genome Announc 2(1), 2014 The G-protein FlhF has a role in polar flagellar placement and general stress response induction in Pseudomonas putida, Mol Microbiol 36(2), 414-423, 2000 The phosphatidylcholine synthase of Pseudomonas putida A ATCC 12633 is responsible for the synthesis of phosphatidylcholine, which acts as a temporary reservoir for Al3+, Microbiology 158(5), 1249-1257, 2012 The putative malate/lactate dehydrogenase from Pseudomonas putida is an NADPH-dependent delta1-piperideine-2-carboxylate/delta1-pyrroline-2-carboxylate reductase involved in the catabolism of D-lysine and D-proline, J Biol Chem 280(7), 5329-5335, 2005 |
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| NCIMB number | NCIMB 9494 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Pseudomonas putida |
| Depositor designation | A3.12 Stanier90 |
| Preservation method | Lyophilised |
| Preserved as | Pseudomonas fluorescens |
| Other catalogue information | Phage host. Host for BDELLOVIBRIO STARRII NCIMB 9561 |
| Price band | A |
| Media | 001 |
| Gas regime | aerobic |
| Growth factors (and/or information) | Lemco agar, pH7.3, 20C, 3d: good growth |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth/Shiny |
| Colony Shape | Circular |
| Colony Elevation | Convex |
| Colony Colour | Off White |
| Colony Opacity | Translucent |
| Cellular Shape | Rod |
| Cellular Size | short |
| Cellular Arrangement | Singly/Pairs |
| Cellular Motility | Yes |
| Gram stain | Gram Negative |
| Gram Stain Photo | NCIMB 9494.jpg |
| Cellular (Other) | 2D: Straight Axis, Parallel Sides, Rounded Ends |
| Depositor Company | American Type Culture Collection (ATCC) |
| Depositor Address | 12301 Parklawn Drive Rockville Maryland 20852 U.S.A. |
| Source | Soil |
| Isolated by | R.Y.Stanier |
| Date of Isolation | 01/01/1946 |
| Date of Accession | 23/12/1963 |
| History | A.B.Pardee -- R.Y.Stanier |
| Other collection IDs | ATCC12633 BS2 CECT324 CIP52.191 DSM291 ICPB2693 IAM1236 IFO14164 NCIMB9528 NCTC10936 |
| Yeast? | False |
| K12 | No |
| References | Stanier R.Y. (1947) J. Bact. 54 p339 Stanier R.Y. (1948) J. Bact. 55 p477 Entner N. and Stanier R.Y. (1951) J. Bact. 62 p181 Barrett J.T. et al (1953) J. Bact. 65 p187 Gunter S.E. (1953) J. Bact. 66 p341 Gunsalus I.C. et al (1953) J. Bact. 66 p538 Stanier R.Y. et al (1953) J. Bact. 66 p543 Gunsalus C.F. et al (1953) J. Bact. 66 p548 Barrett J.T. and Kallio R.E. (1953) J. Bact. 66 p517 Wood W.A. and Schwerdt R.F. (1953) J. biol. Chem. 201 p501 Wood W.A. and Schwerdt R.F. (1954) J. biol. Chem. 206 p625 Kovachevich R. and Wood W.A. (1955) J. biol. Chem. 213 p745 Kovachevich R. and Wood W.A. (1955) J. biol. Chem. 213 p757 Narrod S.A. and Wood W.A. (1956) J. biol. Chem. 220 p45 Casida L.E. (1960) J. Bact. 80 p237 Frampton E.W. and Wood W.A. (1961) J. biol. Chem. 236 p2571 Cain R.B. et al (1961) Biochem. J. 79 p312 Gronlund A.F. and Campbell J.J.R. (1961) J. Bact. 81 p721 Liston J. et al (1963) J. Bact. 85 p1061 Colwell R.R. and Mandel M. (1964) J. Bact. 87 p1412 Jacoby G.A. (1964) Biochem. J. 92 pp1-8 Arthur R.M. (1964) Appl. Microbiol. 12 p289 George D.J. and Philips A.T. (1970). J. biol. Chem. 245(3) pp528-537. Identification of alpha ketobutyrate as the prosthetic group of urocanase from Pseudomonas putida. Hosokawa K. (1970) J. biol. Chem. 245(20) p5304. Regulation of synthesis of early enzymes of p-hydroxybenzoate pathway in Pseudomonas putida. Johnson J.C. et al (1971) J. biol. Chem. 246(5) p1222. Deoxyribonucleic acid dependent ribonucleic acid polymerase of Pseudomonas putida. Robertson D.C. (1971) J. biol. Chem. 246(7) p2084.Structure of 2-keto-3-deoxy-6 phosphogluconate aldolase. Higgins S.J. and Mandestan V.J. (1972) Biochem J. 126 p901 Wheews M.L. and Ornston L.N. (1972) J. Bact. 109 pp790-795 Wu C.H. et al (1972) J. Bact. 109 p796 McCarthy D.H. (1975) J. gen. Microbiol. 86(1) - (misquoted as NCTC 9494) Forster, S., Snape, J. R., Lappin-Scott, H. M., Porter, J. (2002) Simultaneous fluorescent gram staining and activity assessment of activated sludge bacteria. Appl. Environ. Microbiol. 68(10), 4772-4779. IJSEM (2002) 52:513-523 IJSEM (2002) 52:1500 IJSEM (2002) 52:1501 IJSEM (2003) 53:56 The tmRNA website: reductive evolution of tmRNA in plastids and other endosymbionts, Nucleic Acids Res 32(Databaseissue), D104-D108, 2004 cpnDB: a chaperonin sequence database, Genome Res 14(8), 1669-1675, 2004 Accumulation of poly(3-hydroxybutyrate) from octanoate in different pseudomonas belonging to the rRNA homology group I, Syst Appl Microbiol 25(2), 183-188, 2002 Evaluation of oprI and oprL genes as molecular markers for the genus Pseudomonas and their use in studying the biodiversity of a small Belgian River, Res Microbiol 164(3), 254-261, 2013 Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates, Res Microbiol 156(5-6), 763-773, 2005 Isolation and characterization of 23 carbofuran-degrading bacteria from soils from distant geographical areas, Lett Appl Microbiol 31(5), 353-358, 2000 cumA multicopper oxidase genes from diverse Mn(II)-oxidizing and non-Mn(II)-oxidizing Pseudomonas strains, Appl Environ Microbiol 67(9), 4272-4278, 2001 Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes, Microbiology 146 ( Pt 10), 2385-2394, 2000 Improved resolution on the phylogenetic relationships among Pseudomonasby the combined analysis of atpD, carA, recA and 16S rDNA, Antonie Van Leeuwenhoek 86(1), 51-64, 2004 Classification of genus Pseudomonas by MALDI-TOF MS based on ribosomal protein coding in S10-spc-alpha operon at strain level, J Proteome Res 9(12), 6722-6728, 2010 The rice inoculant strain Alcaligenes faecalis A15 is a nitrogen-fixing Pseudomonas stutzeri, Syst Appl Microbiol 22(2), 215-224, 1999 Arthrobacter siderocapsulatus Dubinina and Zhdanov 1975AL is a later subjective synonym of Pseudomonas putida (Trevisan 1889) Migula 1895AL, Int J Syst Evol Microbiol 51(1), 169-170, 2001 A novel molecular marker for studying phylogeny and diversity of phosphate-solubilizing pseudomonads: the pyrroloquinoline quinone biosynthetic gene pqqC, Appl Environ Microbiol 77(20), 21856827, 2011 Extracellular polymeric substances (EPS) producing bacterial strains of municipal wastewater sludge: isolation, molecular identification, EPS characterization and performance for sludge settling and dewatering, Water Res 44(7), 2253-2266, 2010 Flavobacterium limicola sp. nov., a psychrophilic, organic-polymer-degrading bacterium isolated from freshwater sediments, Int J Syst Evol Microbiol 53(2), 519-526, 2003 Identification and characterization of a mandelamide hydrolase and an NAD(P)+-dependent benzaldehyde dehydrogenase from Pseudomonas putida ATCC 12633, J Bacteriol 185(8), 2451-2456, 2003 Identification of novel benzoylformate decarboxylases by growth selection., Appl Environ Microbiol 72(12), 7510-7517, 2006 Identification, Cloning and Biochemical Characterization of Pseudomonas putida A (ATCC 12633) Monooxygenase Enzyme necessary for the Metabolism of Tetradecyltrimethylammonium Bromide, Appl Biochem Biotechnol 173(2), 552-561, 2014 Notification that new names and new combinations have appeared in volume 51, part 1, of the IJSEM, Int J Syst Evol Microbiol 51(2), 269, 2001 Recharacterization of Pseudomonas fulva Iizuka and Komagata 1963, and proposals of Pseudomonas parafulva sp. nov. and Pseudomonas cremoricolorata sp. nov, J Gen Appl Microbiol 47(5), 247-261, 2001 Sequence diversity of the OprD protein of environmental Pseudomonas strains, Environ Microbiol 9(3), 824-835, 2007 The Complete Genome Sequence of Pseudomonas putida NBRC 14164T Confirms High Intraspecies Variation, Genome Announc 2(1), 2014 The G-protein FlhF has a role in polar flagellar placement and general stress response induction in Pseudomonas putida, Mol Microbiol 36(2), 414-423, 2000 The phosphatidylcholine synthase of Pseudomonas putida A ATCC 12633 is responsible for the synthesis of phosphatidylcholine, which acts as a temporary reservoir for Al3+, Microbiology 158(5), 1249-1257, 2012 The putative malate/lactate dehydrogenase from Pseudomonas putida is an NADPH-dependent delta1-piperideine-2-carboxylate/delta1-pyrroline-2-carboxylate reductase involved in the catabolism of D-lysine and D-proline, J Biol Chem 280(7), 5329-5335, 2005 |
