| NCIMB number | NCIMB 10015 |
| Deposit type | Bacteria |
| Type strain | No |
| GMO | No |
| Taxon name | Pseudomonas putida |
| Depositor designation | U |
| Preservation method | Lyophilised |
| Preserved as | Pseudomonas sp. |
| Price band | A |
| Media | 001 |
| Gas regime | aerobic |
| Growth factors (and/or information) | Growth at 30 and 37C CM3, 30C, 18hr: good growth, butyrous consistency |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth/Moist |
| Colony Shape | Circular |
| Colony Elevation | Low Convex |
| Colony Colour | Colourless |
| Colony Opacity | Opaque |
| Cellular Shape | Rod |
| Cellular Size | short |
| Cellular Arrangement | Singly |
| Cellular Motility | Yes |
| Gram stain | Gram Negative |
| Cellular Flagella | Polar - 1-8 |
| Cellular (Other) | Straight Axis, Parallel Sides, Rounded Ends |
| Depositor Name | E.M.Chamberlain |
| Depositor Company | University of Leeds |
| Depositor Address | Department of Biochemistry Leeds U.K. |
| Source | "Mud of a stream, Urbana, Illinois, U.S.A." |
| Isolated by | S. Dagley |
| Date of Accession | 05/05/1967 |
| Other collection IDs | ATCC17514 DSM548 DSM12735 |
| Yeast? | False |
| K12 | No |
| References | Dagley S. et al (1964) Nature 202 p775. Degradation of the benzene nucleus by bacteria. Dagley S. and Gibson D.T. (1965) Biochem J. 95 p466. The bacterial degradation of catechol. Bayly R. (1966) Biochem J. 101 p293. The metabolism of cresols by species of Pseudomonas. Bayly R.C. and Dagley S. (1969) Biochem J. 111 3 p303. Oxoenoic acids as metabolites in the bacterial degradation of catechols Sala-Trepar J.M. et al (1971) Biochem J. 124 p20. The physiological significance of the two divergent metabolic steps in the meta cleavage of catechol by Pseudomonas 10015. Williams P.A. et al (1971) Biochem J. 124 p19. The coexistence of two metabolic pathways in the meta cleavage of catechol by Pseudomonas 10015. Murray K. et al (1972) Eur. J. Biochem. 28 p301. The metabolism of benzoate and methylbenzoates via the meta-cleavage pathway by Pseudomonas arvilla mt-2 Sala-Trepat J.M. et al (1972) Eur. J. Biochem. 28 p347. The metabolic divergence in the meta-cleavage of catechols by Pseudomonas putida NCIB 10015. Murray K. et al (1972) Proc. Biochem. Soc. Biochen J. 128 (3) p99 Collinsworth W.L. et al (1973) J. Bact. 113(2) p922 Bayly R.C. and Wigmore G.J. (1973) J. Bact. 113(3) p1112. Metabolism of phenol and cresols by mutants of Pseudomonas putida. Murray K. and Williams P.A. (1974) J. Bact. 117 (3) p1153 Microbial spoilage of Pharmaceutical Products. E.G. Beveridge (1975) In SAB Tech Series no 9 Microbial aspects of the deterioration of materials. Diversity of bacterial capabilities in utilizing alkylated benzenes and other aromatic compounds, Lett Appl Microbiol 23, 257-260, 1996 Primärschritte der Umwandlung von Chlorbenzol-Derivaten durch Pseudomonas putida, Angewandte Chemie 93, 1026-1027, 1981 A two-component hydroxylase involved in the assimilation of 3-hydroxyphenyl acetate in Pseudomonas putida, J Biol Chem 280(28), 26435-26447, 2005 Determination of chlorinated xenobiotic compounds by microbial biosensors: an improved biosensor for the selective detection of monochlorinated aromatics in water and organicsolvents based on Pseudomonas putida DSM 548, Anal Lett 31, 2361-2373, 1998 Genetic analyses and molecular characterization of the pathways involved in the conversion of 2-phenylethylamine and 2-phenylethanol into phenylacetic acid in Pseudomonas putida U, Environ Microbiol 10(2), 413-432, 2008 Isolation of cholesterol- and deoxycholate-degrading bacteria from soil samples: evidence of a common pathway, Appl Microbiol Biotechnol , 2012 Metabolism of phenol and cresols by mutants of Pseudomonas putida, J Bacteriol 113, 1112-1120, 1973 Molecular characterization of the phenylacetic acid catabolic pathway in Pseudomonas putida U: the phenylacetyl-CoA catabolon, Proc Natl Acad Sci U S A 95(11), 6419-6424, 1998 Molecular cloning and expression in different microbes of the DNA encoding Pseudomonas putida U phenylacetyl-CoA ligase. Use of this gene to improve the rate of benzylpenicillin biosynthesis in Penicillium chrysogenum, J Biol Chem 271(52), 33531-33538, 1996 Novel biodegradable aromatic plastics from a bacterial source. Genetic and biochemical studies on a route of the phenylacetyl-coa catabolon, J Biol Chem 274(41), 29228-29241, 1999 Phenol removal from waste gases with a biological filter by Pseudomonas putida, Biotechnol Bioeng 41(7), 693-699, 1993 The 3,4-dihydroxyphenylacetic acid catabolon, a catabolic unit for degradation of biogenic amines tyramine and dopamine in Pseudomonas putida U, Environ Microbiol 12(6), 1684-1704, 2010 THE BACTERIAL DEGRADATION OF CATECHOL, Biochem J 95, 466-474, 1965 The homogentisate pathway: a central catabolic pathway involved in the degradation of L-phenylalanine, L-tyrosine, and 3-hydroxyphenylacetate in Pseudomonas putida, J Bacteriol 186(15), 5062-5077, 2004 The metabolism of cresols by species of Pseudomonas, Biochem J 101, 293-301, 1966 Two different pathways are involved in the beta-oxidation of n-alkanoic and n-phenylalkanoic acids in Pseudomonas putida U: genetic studies and biotechnological applications, Mol Microbiol 39(4), 863-874, 2001 |
| NCIMB number | NCIMB 10015 |
| Deposit type | Bacteria |
| Type strain | No |
| GMO | No |
| Taxon name | Pseudomonas putida |
| Depositor designation | U |
| Preservation method | Lyophilised |
| Preserved as | Pseudomonas sp. |
| Price band | A |
| Media | 001 |
| Gas regime | aerobic |
| Growth factors (and/or information) | Growth at 30 and 37C CM3, 30C, 18hr: good growth, butyrous consistency |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth/Moist |
| Colony Shape | Circular |
| Colony Elevation | Low Convex |
| Colony Colour | Colourless |
| Colony Opacity | Opaque |
| Cellular Shape | Rod |
| Cellular Size | short |
| Cellular Arrangement | Singly |
| Cellular Motility | Yes |
| Gram stain | Gram Negative |
| Cellular Flagella | Polar - 1-8 |
| Cellular (Other) | Straight Axis, Parallel Sides, Rounded Ends |
| Depositor Name | E.M.Chamberlain |
| Depositor Company | University of Leeds |
| Depositor Address | Department of Biochemistry Leeds U.K. |
| Source | "Mud of a stream, Urbana, Illinois, U.S.A." |
| Isolated by | S. Dagley |
| Date of Accession | 05/05/1967 |
| Other collection IDs | ATCC17514 DSM548 DSM12735 |
| Yeast? | False |
| K12 | No |
| References | Dagley S. et al (1964) Nature 202 p775. Degradation of the benzene nucleus by bacteria. Dagley S. and Gibson D.T. (1965) Biochem J. 95 p466. The bacterial degradation of catechol. Bayly R. (1966) Biochem J. 101 p293. The metabolism of cresols by species of Pseudomonas. Bayly R.C. and Dagley S. (1969) Biochem J. 111 3 p303. Oxoenoic acids as metabolites in the bacterial degradation of catechols Sala-Trepar J.M. et al (1971) Biochem J. 124 p20. The physiological significance of the two divergent metabolic steps in the meta cleavage of catechol by Pseudomonas 10015. Williams P.A. et al (1971) Biochem J. 124 p19. The coexistence of two metabolic pathways in the meta cleavage of catechol by Pseudomonas 10015. Murray K. et al (1972) Eur. J. Biochem. 28 p301. The metabolism of benzoate and methylbenzoates via the meta-cleavage pathway by Pseudomonas arvilla mt-2 Sala-Trepat J.M. et al (1972) Eur. J. Biochem. 28 p347. The metabolic divergence in the meta-cleavage of catechols by Pseudomonas putida NCIB 10015. Murray K. et al (1972) Proc. Biochem. Soc. Biochen J. 128 (3) p99 Collinsworth W.L. et al (1973) J. Bact. 113(2) p922 Bayly R.C. and Wigmore G.J. (1973) J. Bact. 113(3) p1112. Metabolism of phenol and cresols by mutants of Pseudomonas putida. Murray K. and Williams P.A. (1974) J. Bact. 117 (3) p1153 Microbial spoilage of Pharmaceutical Products. E.G. Beveridge (1975) In SAB Tech Series no 9 Microbial aspects of the deterioration of materials. Diversity of bacterial capabilities in utilizing alkylated benzenes and other aromatic compounds, Lett Appl Microbiol 23, 257-260, 1996 Primärschritte der Umwandlung von Chlorbenzol-Derivaten durch Pseudomonas putida, Angewandte Chemie 93, 1026-1027, 1981 A two-component hydroxylase involved in the assimilation of 3-hydroxyphenyl acetate in Pseudomonas putida, J Biol Chem 280(28), 26435-26447, 2005 Determination of chlorinated xenobiotic compounds by microbial biosensors: an improved biosensor for the selective detection of monochlorinated aromatics in water and organicsolvents based on Pseudomonas putida DSM 548, Anal Lett 31, 2361-2373, 1998 Genetic analyses and molecular characterization of the pathways involved in the conversion of 2-phenylethylamine and 2-phenylethanol into phenylacetic acid in Pseudomonas putida U, Environ Microbiol 10(2), 413-432, 2008 Isolation of cholesterol- and deoxycholate-degrading bacteria from soil samples: evidence of a common pathway, Appl Microbiol Biotechnol , 2012 Metabolism of phenol and cresols by mutants of Pseudomonas putida, J Bacteriol 113, 1112-1120, 1973 Molecular characterization of the phenylacetic acid catabolic pathway in Pseudomonas putida U: the phenylacetyl-CoA catabolon, Proc Natl Acad Sci U S A 95(11), 6419-6424, 1998 Molecular cloning and expression in different microbes of the DNA encoding Pseudomonas putida U phenylacetyl-CoA ligase. Use of this gene to improve the rate of benzylpenicillin biosynthesis in Penicillium chrysogenum, J Biol Chem 271(52), 33531-33538, 1996 Novel biodegradable aromatic plastics from a bacterial source. Genetic and biochemical studies on a route of the phenylacetyl-coa catabolon, J Biol Chem 274(41), 29228-29241, 1999 Phenol removal from waste gases with a biological filter by Pseudomonas putida, Biotechnol Bioeng 41(7), 693-699, 1993 The 3,4-dihydroxyphenylacetic acid catabolon, a catabolic unit for degradation of biogenic amines tyramine and dopamine in Pseudomonas putida U, Environ Microbiol 12(6), 1684-1704, 2010 THE BACTERIAL DEGRADATION OF CATECHOL, Biochem J 95, 466-474, 1965 The homogentisate pathway: a central catabolic pathway involved in the degradation of L-phenylalanine, L-tyrosine, and 3-hydroxyphenylacetate in Pseudomonas putida, J Bacteriol 186(15), 5062-5077, 2004 The metabolism of cresols by species of Pseudomonas, Biochem J 101, 293-301, 1966 Two different pathways are involved in the beta-oxidation of n-alkanoic and n-phenylalkanoic acids in Pseudomonas putida U: genetic studies and biotechnological applications, Mol Microbiol 39(4), 863-874, 2001 |