| 载体基本信息 |
| 载体名称 |
pSUPER.retro.neo |
载体抗性 |
Ampicillin |
| 载体长度 |
7641 bp |
载体类型 |
RNAi vectors |
| 筛选标记 |
Neomycin |
拷贝数 |
Low copy number |
| 启动子 |
H1 |
克隆方法 |
Enzyme digestion and ligation |
| 5引物 |
pSR-F: GGAAGCCTTGGCTTTTG , binding site: 1241-1257 |
3引物 |
pSR-R: CGAACGTGACGTCATC , binding site: 2645-2629 |
pSUPER.retro.neo 载体载体图谱
pSUPER.retro.neo 载体载体序列
LOCUS Exported 7641 bp ds-DNA circular SYN 13-JAN-2022
DEFINITION synthetic circular DNA
ACCESSION .
VERSION .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7641)
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7641
/organism="synthetic DNA construct"
/mol_type="other DNA"
misc_feature 579..920
/note="MESV Psi"
/note="packaging signal of murine embryonic stem cell
virus"
CDS 987..1403
/note="gag (truncated)"
/note="truncated Moloney murine leukemia virus (MMLV) gag
gene lacking the start codon"
primer_bind 1422..1438
/note="KS primer"
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(1560..1578)
/note="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
promoter complement(1623..1826)
/note="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
enhancer 1827..2206
/note="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter complement(2430..2644)
/note="H1 promoter"
/note="human H1 RNA promoter"
CDS 3243..4037
/codon_start=1
/gene="aph(3)-II (or nptII)"
/product="aminoglycoside phosphotransferase from Tn5"
/note="NeoR/KanR"
/note="confers resistance to neomycin, kanamycin, and G418
(Geneticin(R))"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
polyA_signal 4101..4149
/note="synthetic polyadenylation signal"
protein_bind 4710..4726
/bound_moiety="lac repressor encoded by lacI"
/note="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4734..4764)
/note="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind 4779..4800
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(5088..5676)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5847..6707)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(6708..6812)
/gene="bla"
/note="AmpR promoter"
LTR 7640..515
/note="5 LTR"
/note="5 long terminal repeat from murine embryonic stem
cell virus"