LOCUS Exported 6919 bp ds-DNA circular SYN 13-MAY-2021
DEFINITION Mammalian expression of Cre recombinase driven by the human
cytomegalovirus IE promoter.
ACCESSION .
VERSION .
KEYWORDS pBS185 CMV-Cre
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6919)
AUTHORS Sauer B, Henderson N
TITLE Targeted insertion of exogenous DNA into the eukaryotic genome by
the Cre recombinase.
JOURNAL New Biol. 1990 May . 2(5):441-9.
PUBMED 2288914
REFERENCE 2 (bases 1 to 6919)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "New Biol.
1990 May . 2(5):441-9."
FEATURES Location/Qualifiers
source 1..6919
/organism="synthetic DNA construct"
/mol_type="other DNA"
primer_bind complement(565..581)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(565..581)
/label=M13 Reverse
/note="In lacZ gene. Also called M13-rev"
primer_bind complement(578..600)
/label=M13/pUC Reverse
/note="In lacZ gene"
protein_bind 589..605
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(613..643)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 658..679
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
primer_bind complement(796..813)
/label=L4440
/note="L4440 vector, forward primer"
rep_origin complement(967..1555)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
primer_bind complement(1047..1066)
/label=pBR322ori-F
/note="pBR322 origin, forward primer"
CDS complement(1726..2586)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
primer_bind 2349..2368
/label=Amp-R
/note="Ampicillin resistance gene, reverse primer"
promoter complement(2587..2691)
/gene="bla"
/label=AmpR promoter
primer_bind 2759..2777
/label=pBRforEco
/note="pBR322 vectors, upsteam of EcoRI site, forward
primer"
primer_bind complement(2815..2837)
/label=pGEX 3
/note="pGEX vectors, reverse primer"
primer_bind 2937..2956
/label=pRS-marker
/note="pRS vectors, use to sequence yeast selectable
marker"
primer_bind 3150..3172
/label=M13/pUC Forward
/note="In lacZ gene"
primer_bind 3164..3181
/label=M13 Forward
/note="In lacZ gene. Also called M13-F20 or M13 (-21)
Forward"
primer_bind 3165..3181
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
enhancer 3267..3646
/label=CMV enhancer
/note="human cytomegalovirus immediate early enhancer"
promoter 3647..3850
/label=CMV promoter
/note="human cytomegalovirus (CMV) immediate early
promoter"
primer_bind 3801..3821
/label=CMV-F
/note="Human CMV immediate early promoter, forward primer"
primer_bind 3847..3871
/label=LNCX
/note="Human CMV promoter, forward primer"
CDS 3991..5022
/codon_start=1
/product="site-specific recombinase"
/label=Cre
/note="Cre is a site-specific recombinase from
bacteriophage P1. Recombination occurs at loxP sequences."
/translation="MSNLLTVHQNLPALPVDATSDEVRKNLMDMFRDRQAFSEHTWKML
LSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGL
PRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAF
LGIAYNTLLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVE
RWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQ
RYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNLDSETGAMVRLLE
DGD"
RBS 6674..6682
/label=Shine-Dalgarno sequence
/note="full consensus sequence for ribosome-binding sites
upstream of start codons in E. coli; complementary to a
region in the 3 end of the 16S rRNA (Chen et al., 1994)"
LOCUS Exported 6919 bp ds-DNA circular SYN 13-MAY-2021
DEFINITION Mammalian expression of Cre recombinase driven by the human
cytomegalovirus IE promoter.
ACCESSION .
VERSION .
KEYWORDS pBS185 CMV-Cre
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6919)
AUTHORS Sauer B, Henderson N
TITLE Targeted insertion of exogenous DNA into the eukaryotic genome by
the Cre recombinase.
JOURNAL New Biol. 1990 May . 2(5):441-9.
PUBMED 2288914
REFERENCE 2 (bases 1 to 6919)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "New Biol.
1990 May . 2(5):441-9."
FEATURES Location/Qualifiers
source 1..6919
/organism="synthetic DNA construct"
/mol_type="other DNA"
primer_bind complement(565..581)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(565..581)
/label=M13 Reverse
/note="In lacZ gene. Also called M13-rev"
primer_bind complement(578..600)
/label=M13/pUC Reverse
/note="In lacZ gene"
protein_bind 589..605
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(613..643)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 658..679
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
primer_bind complement(796..813)
/label=L4440
/note="L4440 vector, forward primer"
rep_origin complement(967..1555)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
primer_bind complement(1047..1066)
/label=pBR322ori-F
/note="pBR322 origin, forward primer"
CDS complement(1726..2586)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
primer_bind 2349..2368
/label=Amp-R
/note="Ampicillin resistance gene, reverse primer"
promoter complement(2587..2691)
/gene="bla"
/label=AmpR promoter
primer_bind 2759..2777
/label=pBRforEco
/note="pBR322 vectors, upsteam of EcoRI site, forward
primer"
primer_bind complement(2815..2837)
/label=pGEX 3
/note="pGEX vectors, reverse primer"
primer_bind 2937..2956
/label=pRS-marker
/note="pRS vectors, use to sequence yeast selectable
marker"
primer_bind 3150..3172
/label=M13/pUC Forward
/note="In lacZ gene"
primer_bind 3164..3181
/label=M13 Forward
/note="In lacZ gene. Also called M13-F20 or M13 (-21)
Forward"
primer_bind 3165..3181
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
enhancer 3267..3646
/label=CMV enhancer
/note="human cytomegalovirus immediate early enhancer"
promoter 3647..3850
/label=CMV promoter
/note="human cytomegalovirus (CMV) immediate early
promoter"
primer_bind 3801..3821
/label=CMV-F
/note="Human CMV immediate early promoter, forward primer"
primer_bind 3847..3871
/label=LNCX
/note="Human CMV promoter, forward primer"
CDS 3991..5022
/codon_start=1
/product="site-specific recombinase"
/label=Cre
/note="Cre is a site-specific recombinase from
bacteriophage P1. Recombination occurs at loxP sequences."
/translation="MSNLLTVHQNLPALPVDATSDEVRKNLMDMFRDRQAFSEHTWKML
LSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGL
PRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAF
LGIAYNTLLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVE
RWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQ
RYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNLDSETGAMVRLLE
DGD"
RBS 6674..6682
/label=Shine-Dalgarno sequence
/note="full consensus sequence for ribosome-binding sites
upstream of start codons in E. coli; complementary to a
region in the 3 end of the 16S rRNA (Chen et al., 1994)"