Taton A, Unglaub F, Wright NE, Zeng WY, Paz-Yepez J, Brahamsha B, Palenik B, Peterson TC, Haerizadeh F, Golden SS, Golden JW.
pCVD070 载体载体图谱
pCVD070 载体载体序列
LOCUS Exported 3816 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Broad host range vector vector pCVD070, complete sequence.
ACCESSION KM017872
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3816)
AUTHORS Taton A, Unglaub F, Wright NE, Zeng WY, Paz-Yepez J, Brahamsha B,
Palenik B, Peterson TC, Haerizadeh F, Golden SS, Golden JW.
TITLE Broad-host-range vector system for synthetic biology and
biotechnology in cyanobacteria
JOURNAL Nucleic Acids Res. (2014) In press
PUBMED 25074377
REFERENCE 2 (bases 1 to 3816)
AUTHORS Taton A, Unglaub F, Wright N, Zeng WY, Paz Yepes J, Brahamsha B,
Palenik B, Peterson T, Haerizadeh F, Golden SS, Golden JW.
TITLE Direct Submission
JOURNAL Submitted (17-JUN-2014) Division of Biological Sciences, University
of California, San Diego, 9500 Gilman Dr., La Jolla, CA 92093, USA
REFERENCE 3 (bases 1 to 3816)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3816
/organism="Broad host range vector vector pCVD070"
/mol_type="other DNA"
/note="pUC19-bla(pUC19) is a nmpicillin (Ap) resistance
device"
/db_xref="taxon:1531926"
misc_feature complement(146..404)
/note="lacZa-part2; lacZalpha fragment upstream of EcoICRI"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 405..410
/label=EcoRV
/note="EcoRV"
misc_feature 408..1531
/note="CVD-ANTR; device for the GC-adaptor assembly:
antibiotic resistance markers"
misc_feature 408..428
/note="GC; GC-adaptor for seamless assembly, flanking
antibiotic resistance markers or Escherichia coli origins
to be assembled with a cyanobacterial replicon; synthetic"
misc_feature 429..434
/label=NheI
/note="NheI"
CDS complement(571..1431)
/codon_start=1
/product="bla"
/label=bla
/note="confers ampicillin resistance; beta-lactamase;
derived from pUC19"
/protein_id="AII99633.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(1432..1503)
/gene="bla"
/label=AmpR promoter
regulatory complement(1432..1501)
/regulatory_class="promoter"
/note="Pbla; upstream region of the bla ORF including
promoter and RBS; derived from pUC19"
misc_feature 1505..1510
/label=AgeI
/note="AgeI"
misc_feature 1511..1531
/note="C2G; GC-adaptor for seamless assembly, flanking
antibiotic resistance markers, functional devices or custom
sequences; synthetic"
misc_feature 1529..1534
/label=EcoRV
/note="EcoRV"
misc_feature complement(1535..1599)
/note="lacZa-part1; lacZalpha fragment upstream of EcoICRI"
misc_feature 1553..1558
/label=XbaI
/note="XbaI"
primer_bind complement(1595..1611)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
regulatory complement(1600..1722)
/regulatory_class="promoter"
/note="PlacZa; lacI-lacZ intergenic region derived from
Escherichia coli including the promoter and RBS"
regulatory complement(1617..1637)
/regulatory_class="other"
/note="lacO; LacO; lac operator (lacO) from Invitrogen
pTrcHis2"
protein_bind 1619..1635
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1643..1673)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1688..1709
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(1938..2611)
/direction=LEFT
/note="ori-pUC19; origin of replication of pUC19"
rep_origin complement(1997..2585)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(2756..3616)
/codon_start=1
/product="bla"
/label=bla
/note="confers ampicillin resistance; beta-lactamase;
derived from pUC19"
/protein_id="AII99632.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(3617..3721)
/gene="bla"
/label=AmpR promoter
regulatory complement(3617..3686)
/regulatory_class="promoter"
/note="Pbla; upstream region of the bla ORF including
promoter and RBS; derived from pUC19"
misc_feature 3747..3752
/label=ZraI
/note="ZraI"
Taton A, Unglaub F, Wright NE, Zeng WY, Paz-Yepez J, Brahamsha B, Palenik B, Peterson TC, Haerizadeh F, Golden SS, Golden JW.
pCVD070 载体载体图谱
pCVD070 载体载体序列
LOCUS Exported 3816 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Broad host range vector vector pCVD070, complete sequence.
ACCESSION KM017872
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3816)
AUTHORS Taton A, Unglaub F, Wright NE, Zeng WY, Paz-Yepez J, Brahamsha B,
Palenik B, Peterson TC, Haerizadeh F, Golden SS, Golden JW.
TITLE Broad-host-range vector system for synthetic biology and
biotechnology in cyanobacteria
JOURNAL Nucleic Acids Res. (2014) In press
PUBMED 25074377
REFERENCE 2 (bases 1 to 3816)
AUTHORS Taton A, Unglaub F, Wright N, Zeng WY, Paz Yepes J, Brahamsha B,
Palenik B, Peterson T, Haerizadeh F, Golden SS, Golden JW.
TITLE Direct Submission
JOURNAL Submitted (17-JUN-2014) Division of Biological Sciences, University
of California, San Diego, 9500 Gilman Dr., La Jolla, CA 92093, USA
REFERENCE 3 (bases 1 to 3816)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3816
/organism="Broad host range vector vector pCVD070"
/mol_type="other DNA"
/note="pUC19-bla(pUC19) is a nmpicillin (Ap) resistance
device"
/db_xref="taxon:1531926"
misc_feature complement(146..404)
/note="lacZa-part2; lacZalpha fragment upstream of EcoICRI"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 405..410
/label=EcoRV
/note="EcoRV"
misc_feature 408..1531
/note="CVD-ANTR; device for the GC-adaptor assembly:
antibiotic resistance markers"
misc_feature 408..428
/note="GC; GC-adaptor for seamless assembly, flanking
antibiotic resistance markers or Escherichia coli origins
to be assembled with a cyanobacterial replicon; synthetic"
misc_feature 429..434
/label=NheI
/note="NheI"
CDS complement(571..1431)
/codon_start=1
/product="bla"
/label=bla
/note="confers ampicillin resistance; beta-lactamase;
derived from pUC19"
/protein_id="AII99633.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(1432..1503)
/gene="bla"
/label=AmpR promoter
regulatory complement(1432..1501)
/regulatory_class="promoter"
/note="Pbla; upstream region of the bla ORF including
promoter and RBS; derived from pUC19"
misc_feature 1505..1510
/label=AgeI
/note="AgeI"
misc_feature 1511..1531
/note="C2G; GC-adaptor for seamless assembly, flanking
antibiotic resistance markers, functional devices or custom
sequences; synthetic"
misc_feature 1529..1534
/label=EcoRV
/note="EcoRV"
misc_feature complement(1535..1599)
/note="lacZa-part1; lacZalpha fragment upstream of EcoICRI"
misc_feature 1553..1558
/label=XbaI
/note="XbaI"
primer_bind complement(1595..1611)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
regulatory complement(1600..1722)
/regulatory_class="promoter"
/note="PlacZa; lacI-lacZ intergenic region derived from
Escherichia coli including the promoter and RBS"
regulatory complement(1617..1637)
/regulatory_class="other"
/note="lacO; LacO; lac operator (lacO) from Invitrogen
pTrcHis2"
protein_bind 1619..1635
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1643..1673)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1688..1709
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(1938..2611)
/direction=LEFT
/note="ori-pUC19; origin of replication of pUC19"
rep_origin complement(1997..2585)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(2756..3616)
/codon_start=1
/product="bla"
/label=bla
/note="confers ampicillin resistance; beta-lactamase;
derived from pUC19"
/protein_id="AII99632.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(3617..3721)
/gene="bla"
/label=AmpR promoter
regulatory complement(3617..3686)
/regulatory_class="promoter"
/note="Pbla; upstream region of the bla ORF including
promoter and RBS; derived from pUC19"
misc_feature 3747..3752
/label=ZraI
/note="ZraI"