Taton A, Unglaub F, Wright NE, Zeng WY, Paz-Yepez J, Brahamsha B, Palenik B, Peterson TC, Haerizadeh F, Golden SS, Golden JW.
pCVD019 载体载体图谱
pCVD019 载体载体序列
LOCUS Exported 4098 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Broad host range vector vector pCVD019, complete sequence.
ACCESSION KM017920
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4098)
AUTHORS Taton A, Unglaub F, Wright NE, Zeng WY, Paz-Yepez J, Brahamsha B,
Palenik B, Peterson TC, Haerizadeh F, Golden SS, Golden JW.
TITLE Broad-host-range vector system for synthetic biology and
biotechnology in cyanobacteria
JOURNAL Nucleic Acids Res. (2014) In press
PUBMED 25074377
REFERENCE 2 (bases 1 to 4098)
AUTHORS Taton A, Unglaub F, Wright N, Zeng WY, Paz Yepes J, Brahamsha B,
Palenik B, Peterson T, Haerizadeh F, Golden SS, Golden JW.
TITLE Direct Submission
JOURNAL Submitted (17-JUN-2014) Division of Biological Sciences, University
of California, San Diego, 9500 Gilman Dr., La Jolla, CA 92093, USA
REFERENCE 3 (bases 1 to 4098)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4098
/organism="Broad host range vector vector pCVD019"
/mol_type="other DNA"
/note="S7942NS1-RK2BOM is a chromosome integration device
that comprises the recombination site NS1 for Synechococcus
elongatus PCC7942, an origin of replication for E coli from
pBR322 and an oriT site from RK2/RP4 for conjugal transfer"
/db_xref="taxon:1531877"
misc_feature 46..51
/label=ZraI
/note="ZraI"
misc_feature 49..2914
/note="CVD-BHR-NS; device for the GC-adaptor assembly: BHR
replicon and neutral sites or right arm of a double
recombination KO"
misc_feature 49..69
/note="G5C5; GC-adaptor for seamless assembly, flanking a
BHR replicons, neutral sites, or cyanobacterial replicons;
synthetic"
misc_feature 70..75
/label=XbaI
/note="XbaI"
misc_recomb 76..855
/note="S7942NS1-RA; right arm of the homologous
recombination site NS1 into the chromosome of Synechococcus
elongatus PCC7942 derived from INSD accession NC_007604,
U30252"
rep_origin 866..1539
/note="ori-pBR322; origin of replication of pBR322"
rep_origin 892..1480
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
oriT 1663..1966
/note="oriT; streamlined origin of transfer from RP4 for
conjugal transfer; PCR amplified from pRL692 INSD accession
AF424805"
oriT 1721..1830
/note="incP origin of transfer"
misc_recomb 2017..2887
/note="S7942NS1-LA; left arm of the homologous
recombination site NS1 into the chromosome of Synechococcus
elongatus PCC7942 derived from INSD accession NC_007604,
U30252"
misc_feature 2606..2611
/label=XbaI
/note="XbaI"
misc_feature 2793..2798
/label=NheI
/note="NheI"
misc_feature 2853..2858
/label=EcoRV
/note="EcoRV"
misc_feature 2888..2893
/label=NheI
/note="NheI"
misc_feature 2894..2914
/note="GC; GC-adaptor for seamless assembly, flanking BHR
replicons or neutral sites; synthetic"
misc_feature 2912..2917
/label=ZraI
/note="ZraI"
CDS complement(3038..3898)
/codon_start=1
/product="bla"
/label=bla
/note="confers ampicillin resistance; beta-lactamase;
derived from pUC19"
/protein_id="AII99750.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(3899..4003)
/gene="bla"
/label=AmpR promoter
regulatory complement(3899..3968)
/regulatory_class="promoter"
/note="Pbla; upstream region of the bla ORF including
promoter and RBS; derived from pUC19"
misc_feature 4029..4034
/label=ZraI
/note="ZraI"
Taton A, Unglaub F, Wright NE, Zeng WY, Paz-Yepez J, Brahamsha B, Palenik B, Peterson TC, Haerizadeh F, Golden SS, Golden JW.
pCVD019 载体载体图谱
pCVD019 载体载体序列
LOCUS Exported 4098 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Broad host range vector vector pCVD019, complete sequence.
ACCESSION KM017920
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4098)
AUTHORS Taton A, Unglaub F, Wright NE, Zeng WY, Paz-Yepez J, Brahamsha B,
Palenik B, Peterson TC, Haerizadeh F, Golden SS, Golden JW.
TITLE Broad-host-range vector system for synthetic biology and
biotechnology in cyanobacteria
JOURNAL Nucleic Acids Res. (2014) In press
PUBMED 25074377
REFERENCE 2 (bases 1 to 4098)
AUTHORS Taton A, Unglaub F, Wright N, Zeng WY, Paz Yepes J, Brahamsha B,
Palenik B, Peterson T, Haerizadeh F, Golden SS, Golden JW.
TITLE Direct Submission
JOURNAL Submitted (17-JUN-2014) Division of Biological Sciences, University
of California, San Diego, 9500 Gilman Dr., La Jolla, CA 92093, USA
REFERENCE 3 (bases 1 to 4098)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4098
/organism="Broad host range vector vector pCVD019"
/mol_type="other DNA"
/note="S7942NS1-RK2BOM is a chromosome integration device
that comprises the recombination site NS1 for Synechococcus
elongatus PCC7942, an origin of replication for E coli from
pBR322 and an oriT site from RK2/RP4 for conjugal transfer"
/db_xref="taxon:1531877"
misc_feature 46..51
/label=ZraI
/note="ZraI"
misc_feature 49..2914
/note="CVD-BHR-NS; device for the GC-adaptor assembly: BHR
replicon and neutral sites or right arm of a double
recombination KO"
misc_feature 49..69
/note="G5C5; GC-adaptor for seamless assembly, flanking a
BHR replicons, neutral sites, or cyanobacterial replicons;
synthetic"
misc_feature 70..75
/label=XbaI
/note="XbaI"
misc_recomb 76..855
/note="S7942NS1-RA; right arm of the homologous
recombination site NS1 into the chromosome of Synechococcus
elongatus PCC7942 derived from INSD accession NC_007604,
U30252"
rep_origin 866..1539
/note="ori-pBR322; origin of replication of pBR322"
rep_origin 892..1480
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
oriT 1663..1966
/note="oriT; streamlined origin of transfer from RP4 for
conjugal transfer; PCR amplified from pRL692 INSD accession
AF424805"
oriT 1721..1830
/note="incP origin of transfer"
misc_recomb 2017..2887
/note="S7942NS1-LA; left arm of the homologous
recombination site NS1 into the chromosome of Synechococcus
elongatus PCC7942 derived from INSD accession NC_007604,
U30252"
misc_feature 2606..2611
/label=XbaI
/note="XbaI"
misc_feature 2793..2798
/label=NheI
/note="NheI"
misc_feature 2853..2858
/label=EcoRV
/note="EcoRV"
misc_feature 2888..2893
/label=NheI
/note="NheI"
misc_feature 2894..2914
/note="GC; GC-adaptor for seamless assembly, flanking BHR
replicons or neutral sites; synthetic"
misc_feature 2912..2917
/label=ZraI
/note="ZraI"
CDS complement(3038..3898)
/codon_start=1
/product="bla"
/label=bla
/note="confers ampicillin resistance; beta-lactamase;
derived from pUC19"
/protein_id="AII99750.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(3899..4003)
/gene="bla"
/label=AmpR promoter
regulatory complement(3899..3968)
/regulatory_class="promoter"
/note="Pbla; upstream region of the bla ORF including
promoter and RBS; derived from pUC19"
misc_feature 4029..4034
/label=ZraI
/note="ZraI"