LOCUS Exported 7827 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector TKVBL-w+, complete sequence.
ACCESSION FJ804477
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7827)
AUTHORS Kondo S, Booker M, Perrimon N.
TITLE Cross-species RNAi rescue platform in Drosophila melanogaster
JOURNAL Genetics 183 (3), 1165-1173 (2009)
PUBMED 19720858
REFERENCE 2 (bases 1 to 7827)
AUTHORS Kondo S, Booker M, Perrimon N.
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2009) Department of Genetics, Harvard Medical
School, 77 Avenue Louis Pasteur, Boston, MA 02115, USA
REFERENCE 3 (bases 1 to 7827)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7827
/organism="Cloning vector TKVBL-w+"
/mol_type="other DNA"
/db_xref="taxon:689694"
protein_bind complement(1107..1140)
/label=loxP
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
CDS join(1898..1969,2364..2637,2712..3366,3428..3743,3964..4095,
4166..4780)
/codon_start=1
/gene="white"
/product="Drosophila white gene eye color pigment"
/label=mini-white
/note="This is a modified version of the white gene lacking
part of the first intron."
/translation="MGQEDQELLIRGGSKHPSAEHLNNGDSGAASQSCINQGFGQAKNY
GTLLPPSPPEDSGSGSGQLAENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERH
IPAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNG
QPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQEL
SLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQ
VLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCP
TNYNPADFYVQVLAVVPGREIESRDRIAKICDNFAISKVARDMEQLLATKNLEKPLEQP
ENGYTYKATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVG
VMNINGAIFLFLTNMTFQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPL
FLTVPLVFTAIAYPMIGLRAGVLHFFNCLALVTLVANVSTSFGYLISCASSSTSMALSV
GPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVEPGEISCTSS
NTTCPSSGKVILETLNFSAADLPLDYVGLAILIVSFRVLAYLALRLRARRKE"
CDS complement(5735..6550)
/codon_start=1
/gene="aph(3)-Ia"
/product="aminoglycoside phosphotransferase"
/label=KanR
/note="confers resistance to kanamycin in bacteria or G418
(Geneticin(R)) in eukaryotes"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
rep_origin 6687..7301
/label=oriV
/note="origin of replication for the bacterial F plasmid"
rep_origin 6778..7309
/label=oriV
/note="incP origin of replication"
protein_bind 7344..7413
/label=attB
/bound_moiety="phage phi-C31 integrase"
/note="attB site for the phi-C31 integrase (Groth et al.,
2000)"
mobile_element 7639..7804
/mobile_element_type="transposon:Tn7"
/note="mini-Tn7 element (left end of the Tn7 transposon)"
LOCUS Exported 7827 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector TKVBL-w+, complete sequence.
ACCESSION FJ804477
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7827)
AUTHORS Kondo S, Booker M, Perrimon N.
TITLE Cross-species RNAi rescue platform in Drosophila melanogaster
JOURNAL Genetics 183 (3), 1165-1173 (2009)
PUBMED 19720858
REFERENCE 2 (bases 1 to 7827)
AUTHORS Kondo S, Booker M, Perrimon N.
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2009) Department of Genetics, Harvard Medical
School, 77 Avenue Louis Pasteur, Boston, MA 02115, USA
REFERENCE 3 (bases 1 to 7827)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7827
/organism="Cloning vector TKVBL-w+"
/mol_type="other DNA"
/db_xref="taxon:689694"
protein_bind complement(1107..1140)
/label=loxP
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
CDS join(1898..1969,2364..2637,2712..3366,3428..3743,3964..4095,
4166..4780)
/codon_start=1
/gene="white"
/product="Drosophila white gene eye color pigment"
/label=mini-white
/note="This is a modified version of the white gene lacking
part of the first intron."
/translation="MGQEDQELLIRGGSKHPSAEHLNNGDSGAASQSCINQGFGQAKNY
GTLLPPSPPEDSGSGSGQLAENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERH
IPAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNG
QPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQEL
SLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQ
VLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCP
TNYNPADFYVQVLAVVPGREIESRDRIAKICDNFAISKVARDMEQLLATKNLEKPLEQP
ENGYTYKATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVG
VMNINGAIFLFLTNMTFQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPL
FLTVPLVFTAIAYPMIGLRAGVLHFFNCLALVTLVANVSTSFGYLISCASSSTSMALSV
GPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVEPGEISCTSS
NTTCPSSGKVILETLNFSAADLPLDYVGLAILIVSFRVLAYLALRLRARRKE"
CDS complement(5735..6550)
/codon_start=1
/gene="aph(3)-Ia"
/product="aminoglycoside phosphotransferase"
/label=KanR
/note="confers resistance to kanamycin in bacteria or G418
(Geneticin(R)) in eukaryotes"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
rep_origin 6687..7301
/label=oriV
/note="origin of replication for the bacterial F plasmid"
rep_origin 6778..7309
/label=oriV
/note="incP origin of replication"
protein_bind 7344..7413
/label=attB
/bound_moiety="phage phi-C31 integrase"
/note="attB site for the phi-C31 integrase (Groth et al.,
2000)"
mobile_element 7639..7804
/mobile_element_type="transposon:Tn7"
/note="mini-Tn7 element (left end of the Tn7 transposon)"