LOCUS Exported 5234 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pYC55, complete sequence.
ACCESSION KP238581
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5234)
AUTHORS Yanez Carrillo P, Castano Navarro I.
TITLE Expression vectors for C-terminal fusions with fluorescent proteins
and epitope tags in C. glabrata
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5234)
AUTHORS Yanez Carrillo P, Castano Navarro I.
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2014) Division de Biologia Molecular, Instituto
Potosino de Investigacion Cientifica y Tecnologica, Camino a la
Presa San Jose 2055 Col. Lomas 4 seccion, San Luis Potosi 78216,
Mexico
REFERENCE 3 (bases 1 to 5234)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5234
/organism="Cloning vector pYC55"
/mol_type="other DNA"
/label=derived from Candida glabrata
/note="derived from Candida glabrata"
/db_xref="taxon:1629577"
regulatory 348..751
/regulatory_class="promoter"
/note="region upstream of TEF1 orf in Saccharomyces
cerevisiae"
promoter 349..747
/gene="S. cerevisiae TEF1"
/label=TEF1 promoter
/note="promoter for EF-1-alpha"
CDS 761..1333
/codon_start=1
/gene="NATMX"
/product="nourseothricine-resistance protein"
/label=NATMX
/protein_id="AJW76811.1"
/translation="MGTTLDDTAYRYRTSVPGDAEAIEALDGSFTTDTVFRVTATGDGF
TLREVPVDPPLTKVFPDDESDDESDDGEDGDPDSRTFVAYGDDGDLAGFVVVSYSGWNR
RLTVEDIEVAPEHRGHGVGRALMGLATEFARELGAGHLWLEVTNVNAPAIHAYRRMGFT
LCGLDTALYDGTASDGEQALYMSMPCP"
gene 761..1333
/gene="NATMX"
/label=NATMX
regulatory 1340..1587
/regulatory_class="terminator"
/note="region downstream of CYC1 orf of Saccharomyces
cerevisiae"
terminator 1340..1587
/gene="S. cerevisiae CYC1"
/label=CYC1 terminator
/note="transcription terminator for CYC1"
primer_bind 1609..1625
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
CDS 1666..2382
/codon_start=1
/gene="YFP"
/product="yellow fluorescent protein"
/label=YFP
/protein_id="AJW76812.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
LICTTGKLPVPWPTLVTTLGYGLMCFARYPDHMKRHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKA
NFKIRHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
gene 1666..2382
/gene="YFP"
/label=YFP
primer_bind complement(2384..2400)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2437..2455)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2476..2492)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2500..2516
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2524..2554)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2569..2590
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2878..3466)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3637..4497)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4498..4569)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 5234 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pYC55, complete sequence.
ACCESSION KP238581
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5234)
AUTHORS Yanez Carrillo P, Castano Navarro I.
TITLE Expression vectors for C-terminal fusions with fluorescent proteins
and epitope tags in C. glabrata
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5234)
AUTHORS Yanez Carrillo P, Castano Navarro I.
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2014) Division de Biologia Molecular, Instituto
Potosino de Investigacion Cientifica y Tecnologica, Camino a la
Presa San Jose 2055 Col. Lomas 4 seccion, San Luis Potosi 78216,
Mexico
REFERENCE 3 (bases 1 to 5234)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5234
/organism="Cloning vector pYC55"
/mol_type="other DNA"
/label=derived from Candida glabrata
/note="derived from Candida glabrata"
/db_xref="taxon:1629577"
regulatory 348..751
/regulatory_class="promoter"
/note="region upstream of TEF1 orf in Saccharomyces
cerevisiae"
promoter 349..747
/gene="S. cerevisiae TEF1"
/label=TEF1 promoter
/note="promoter for EF-1-alpha"
CDS 761..1333
/codon_start=1
/gene="NATMX"
/product="nourseothricine-resistance protein"
/label=NATMX
/protein_id="AJW76811.1"
/translation="MGTTLDDTAYRYRTSVPGDAEAIEALDGSFTTDTVFRVTATGDGF
TLREVPVDPPLTKVFPDDESDDESDDGEDGDPDSRTFVAYGDDGDLAGFVVVSYSGWNR
RLTVEDIEVAPEHRGHGVGRALMGLATEFARELGAGHLWLEVTNVNAPAIHAYRRMGFT
LCGLDTALYDGTASDGEQALYMSMPCP"
gene 761..1333
/gene="NATMX"
/label=NATMX
regulatory 1340..1587
/regulatory_class="terminator"
/note="region downstream of CYC1 orf of Saccharomyces
cerevisiae"
terminator 1340..1587
/gene="S. cerevisiae CYC1"
/label=CYC1 terminator
/note="transcription terminator for CYC1"
primer_bind 1609..1625
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
CDS 1666..2382
/codon_start=1
/gene="YFP"
/product="yellow fluorescent protein"
/label=YFP
/protein_id="AJW76812.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
LICTTGKLPVPWPTLVTTLGYGLMCFARYPDHMKRHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKA
NFKIRHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
gene 1666..2382
/gene="YFP"
/label=YFP
primer_bind complement(2384..2400)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2437..2455)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2476..2492)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2500..2516
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2524..2554)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2569..2590
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2878..3466)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3637..4497)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4498..4569)
/gene="bla"
/label=AmpR promoter