LOCUS Exported 6412 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pYC34, complete sequence.
ACCESSION KP238573
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6412)
AUTHORS Yanez Carrillo P, Castano Navarro I.
TITLE Expression vectors for C-terminal fusions with fluorescent proteins
and epitope tags in C. glabrata
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6412)
AUTHORS Yanez Carrillo P, Castano Navarro I.
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2014) Division de Biologia Molecular, Instituto
Potosino de Investigacion Cientifica y Tecnologica, Camino a la
Presa San Jose 2055 Col. Lomas 4 seccion, San Luis Potosi 78216,
Mexico
REFERENCE 3 (bases 1 to 6412)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6412
/organism="Cloning vector pYC34"
/mol_type="other DNA"
/label=derived from Candida glabrata
/note="derived from Candida glabrata"
/db_xref="taxon:1629569"
promoter 666..737
/gene="bla"
/label=AmpR promoter
CDS 738..1598
/codon_start=1
/gene="bla"
/product="ampicillin-resistance protein"
/label=bla
/protein_id="AJW76799.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 738..1598
/gene="bla"
/label=bla
rep_origin 1769..2357
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
promoter 2681..2711
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2719..2735
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2743..2759
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 2780..2798
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
regulatory 2816..3218
/regulatory_class="promoter"
/note="region upstream of TEF1 orf in Saccharomyces
cerevisiae"
promoter 2816..3214
/gene="S. cerevisiae TEF1"
/label=TEF1 promoter
/note="promoter for EF-1-alpha"
primer_bind 3218..3234
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
CDS 3238..3948
/codon_start=1
/gene="mCherry"
/product="red fluorescent protein"
/label=mCherry
/protein_id="AJW76800.1"
/translation="MVSKGEEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEG
TQTAKLKVTKGGPLPFAWDILSPQFMYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNF
EDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALK
GEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERA
EGRHSTGGMDELYK"
gene 3238..3948
/gene="mCherry"
/label=mCherry
primer_bind complement(3987..4003)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
regulatory 4047..4403
/regulatory_class="terminator"
/note="region downstream of HIS3 orf in Candida glabrata
BG2"
promoter complement(4418..4436)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(4446..4462)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 4607..5062
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
CDS complement(5193..5996)
/codon_start=1
/gene="S. cerevisiae URA3"
/product="orotidine-5-phosphate decarboxylase, required
for uracil biosynthesis"
/label=URA3
/note="yeast auxotrophic marker, counterselectable with
5-fluoroorotic acid (5-FOA)"
/translation="MSKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELL
ELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQ
YSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLSTGE
YTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDD
VVSTGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN"
promoter complement(5997..6212)
/gene="S. cerevisiae URA3"
/label=URA3 promoter
LOCUS Exported 6412 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pYC34, complete sequence.
ACCESSION KP238573
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6412)
AUTHORS Yanez Carrillo P, Castano Navarro I.
TITLE Expression vectors for C-terminal fusions with fluorescent proteins
and epitope tags in C. glabrata
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6412)
AUTHORS Yanez Carrillo P, Castano Navarro I.
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2014) Division de Biologia Molecular, Instituto
Potosino de Investigacion Cientifica y Tecnologica, Camino a la
Presa San Jose 2055 Col. Lomas 4 seccion, San Luis Potosi 78216,
Mexico
REFERENCE 3 (bases 1 to 6412)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6412
/organism="Cloning vector pYC34"
/mol_type="other DNA"
/label=derived from Candida glabrata
/note="derived from Candida glabrata"
/db_xref="taxon:1629569"
promoter 666..737
/gene="bla"
/label=AmpR promoter
CDS 738..1598
/codon_start=1
/gene="bla"
/product="ampicillin-resistance protein"
/label=bla
/protein_id="AJW76799.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 738..1598
/gene="bla"
/label=bla
rep_origin 1769..2357
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
promoter 2681..2711
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2719..2735
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2743..2759
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 2780..2798
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
regulatory 2816..3218
/regulatory_class="promoter"
/note="region upstream of TEF1 orf in Saccharomyces
cerevisiae"
promoter 2816..3214
/gene="S. cerevisiae TEF1"
/label=TEF1 promoter
/note="promoter for EF-1-alpha"
primer_bind 3218..3234
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
CDS 3238..3948
/codon_start=1
/gene="mCherry"
/product="red fluorescent protein"
/label=mCherry
/protein_id="AJW76800.1"
/translation="MVSKGEEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEG
TQTAKLKVTKGGPLPFAWDILSPQFMYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNF
EDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALK
GEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERA
EGRHSTGGMDELYK"
gene 3238..3948
/gene="mCherry"
/label=mCherry
primer_bind complement(3987..4003)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
regulatory 4047..4403
/regulatory_class="terminator"
/note="region downstream of HIS3 orf in Candida glabrata
BG2"
promoter complement(4418..4436)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(4446..4462)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 4607..5062
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
CDS complement(5193..5996)
/codon_start=1
/gene="S. cerevisiae URA3"
/product="orotidine-5-phosphate decarboxylase, required
for uracil biosynthesis"
/label=URA3
/note="yeast auxotrophic marker, counterselectable with
5-fluoroorotic acid (5-FOA)"
/translation="MSKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELL
ELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQ
YSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLSTGE
YTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDD
VVSTGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN"
promoter complement(5997..6212)
/gene="S. cerevisiae URA3"
/label=URA3 promoter