LOCUS Exported 4559 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transient expression vector pXSN-FLAG, complete sequence.
ACCESSION FJ905204
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4559)
AUTHORS Chen S, Songkumarn P, Liu J, Wang GL.
TITLE A versatile zero background T-vector system for gene cloning and
functional genomics
JOURNAL Plant Physiol. 150 (3), 1111-1121 (2009)
PUBMED 19403729
REFERENCE 2 (bases 1 to 4559)
AUTHORS Chen S, Songkumarn P, Liu J, Wang G-L.
TITLE Direct Submission
JOURNAL Submitted (09-APR-2009) Department of Plant Pathology, The Ohio
State University, 201 Kottman Hall, 2021 Coffey Rd, Columbus, OH
43210, USA
REFERENCE 3 (bases 1 to 4559)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4559
/organism="Transient expression vector pXSN-FLAG"
/mol_type="other DNA"
/db_xref="taxon:643597"
regulatory complement(7..270)
/regulatory_class="terminator"
/note="Nos terminator"
terminator 8..260
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
CDS 627..932
/codon_start=1
/gene="ccdB"
/product="CcdB"
/label=ccdB
/protein_id="ACR08730.1"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
gene 627..932
/gene="ccdB"
/label=ccdB
misc_feature complement(988..1014)
/label=FLAG-tag
/note="FLAG-tag"
CDS complement(988..1011)
/codon_start=1
/product="FLAG(R) epitope tag, followed by an enterokinase
cleavage site"
/label=FLAG
/translation="DYKDDDDK"
regulatory complement(1029..1919)
/regulatory_class="promoter"
/note="CaMV35S promoter"
promoter complement(1164..1508)
/label=CaMV 35S promoter
/note="strong constitutive promoter from cauliflower mosaic
virus"
primer_bind complement(1934..1950)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 2424..2528
/gene="bla"
/label=AmpR promoter
CDS 2529..3389
/codon_start=1
/product="beta-lactamase"
/label=beta-lactamase
/note="confers resistance to ampicillin"
/protein_id="ACR08731.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 3537..4180
/label=derived from puc19
/note="derived from puc19"
rep_origin 3560..4148
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 4436..4457
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 4472..4502
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4510..4526
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 4534..4550
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
LOCUS Exported 4559 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transient expression vector pXSN-FLAG, complete sequence.
ACCESSION FJ905204
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4559)
AUTHORS Chen S, Songkumarn P, Liu J, Wang GL.
TITLE A versatile zero background T-vector system for gene cloning and
functional genomics
JOURNAL Plant Physiol. 150 (3), 1111-1121 (2009)
PUBMED 19403729
REFERENCE 2 (bases 1 to 4559)
AUTHORS Chen S, Songkumarn P, Liu J, Wang G-L.
TITLE Direct Submission
JOURNAL Submitted (09-APR-2009) Department of Plant Pathology, The Ohio
State University, 201 Kottman Hall, 2021 Coffey Rd, Columbus, OH
43210, USA
REFERENCE 3 (bases 1 to 4559)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4559
/organism="Transient expression vector pXSN-FLAG"
/mol_type="other DNA"
/db_xref="taxon:643597"
regulatory complement(7..270)
/regulatory_class="terminator"
/note="Nos terminator"
terminator 8..260
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
CDS 627..932
/codon_start=1
/gene="ccdB"
/product="CcdB"
/label=ccdB
/protein_id="ACR08730.1"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
gene 627..932
/gene="ccdB"
/label=ccdB
misc_feature complement(988..1014)
/label=FLAG-tag
/note="FLAG-tag"
CDS complement(988..1011)
/codon_start=1
/product="FLAG(R) epitope tag, followed by an enterokinase
cleavage site"
/label=FLAG
/translation="DYKDDDDK"
regulatory complement(1029..1919)
/regulatory_class="promoter"
/note="CaMV35S promoter"
promoter complement(1164..1508)
/label=CaMV 35S promoter
/note="strong constitutive promoter from cauliflower mosaic
virus"
primer_bind complement(1934..1950)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 2424..2528
/gene="bla"
/label=AmpR promoter
CDS 2529..3389
/codon_start=1
/product="beta-lactamase"
/label=beta-lactamase
/note="confers resistance to ampicillin"
/protein_id="ACR08731.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 3537..4180
/label=derived from puc19
/note="derived from puc19"
rep_origin 3560..4148
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 4436..4457
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 4472..4502
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4510..4526
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 4534..4550
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"