LOCUS Exported 4861 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pWAS, complete sequence.
ACCESSION MH488912
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4861)
AUTHORS Kim B, Binkley R, Kim HU, Lee SY.
TITLE Metabolic engineering of Escherichia coli for the enhanced
production of l-tyrosine
JOURNAL Biotechnol. Bioeng. (2018) In press
PUBMED 30019750
REFERENCE 2 (bases 1 to 4861)
AUTHORS Na D, Yoo SM, Chung H, Park H, Park JH, Lee SY.
TITLE Direct Submission
JOURNAL Submitted (15-JUN-2018) Dept. Chemical and Biomolecular Engineering,
Korea Advanced Institute of Science and Technology, Daehak-ro 291,
Daejeon 34141, South Korea
REFERENCE 3 (bases 1 to 4861)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4861
/organism="Cloning vector pWAS"
/lab_host="Escherichia coli"
/mol_type="other DNA"
/db_xref="taxon:2301187"
rep_origin complement(281..895)
/direction=LEFT
/label=ColE1
/note="ColE1"
rep_origin 292..880
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
regulatory complement(1117..1245)
/regulatory_class="terminator"
/note="T1/TE"
terminator 1123..1150
/label=T7Te terminator
/note="phage T7 early transcription terminator"
terminator 1166..1237
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
ncRNA complement(1252..1330)
/product="micC"
/label=antisense_RNA
/ncRNA_class="antisense_RNA"
regulatory complement(1331..1379)
/regulatory_class="promoter"
/note="lambda PR promoter"
primer_bind complement(1399..1415)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
terminator 1422..1449
/label=T7Te terminator
/note="phage T7 early transcription terminator"
terminator 1465..1536
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
CDS complement(1551..2264)
/codon_start=1
/product="lambda cI repressor (temperature sensitive)"
/label=lambda cI repressor
/protein_id="AXN69964.1"
/translation="MSTKKKPLTQEQLEDARRLKAIYEKKKNELGLSQESVADKMGMGQ
SGVGALFNGINALNAYNAALLAKILKVSVEEFSPSIAREIYEMYEAVSMQPSLRSEYEY
PVFSHVQAGMFSPKLRTFTKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPD
GMLILVDPEQAVEPGDFCIARLGGDEFTFKKLIRDSGQVFLQPLNPQYPMIPCNESCSV
VGEVIASQWPEETFG"
promoter complement(2307..2591)
/gene="araBAD"
/label=araBAD promoter
/note="promoter of the L-arabinose operon of E. coli; the
araC regulatory gene is transcribed in the opposite
direction (Guzman et al., 1995)"
regulatory complement(2307..2341)
/regulatory_class="promoter"
/note="pBAD"
CDS 2618..3496
/codon_start=1
/gene="araC"
/product="arabinose operon regulatory protein"
/label=araC
/protein_id="AXN69965.1"
/translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGY
ILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYW
HEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRR
MEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGIS
VLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE
EKVNDVAVKLS"
gene 2618..3496
/gene="araC"
/label=araC
promoter 3718..3822
/gene="bla"
/label=AmpR promoter
CDS 3823..4683
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/protein_id="AXN69966.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 3823..4683
/gene="bla"
/label=bla
LOCUS Exported 4861 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pWAS, complete sequence.
ACCESSION MH488912
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4861)
AUTHORS Kim B, Binkley R, Kim HU, Lee SY.
TITLE Metabolic engineering of Escherichia coli for the enhanced
production of l-tyrosine
JOURNAL Biotechnol. Bioeng. (2018) In press
PUBMED 30019750
REFERENCE 2 (bases 1 to 4861)
AUTHORS Na D, Yoo SM, Chung H, Park H, Park JH, Lee SY.
TITLE Direct Submission
JOURNAL Submitted (15-JUN-2018) Dept. Chemical and Biomolecular Engineering,
Korea Advanced Institute of Science and Technology, Daehak-ro 291,
Daejeon 34141, South Korea
REFERENCE 3 (bases 1 to 4861)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4861
/organism="Cloning vector pWAS"
/lab_host="Escherichia coli"
/mol_type="other DNA"
/db_xref="taxon:2301187"
rep_origin complement(281..895)
/direction=LEFT
/label=ColE1
/note="ColE1"
rep_origin 292..880
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
regulatory complement(1117..1245)
/regulatory_class="terminator"
/note="T1/TE"
terminator 1123..1150
/label=T7Te terminator
/note="phage T7 early transcription terminator"
terminator 1166..1237
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
ncRNA complement(1252..1330)
/product="micC"
/label=antisense_RNA
/ncRNA_class="antisense_RNA"
regulatory complement(1331..1379)
/regulatory_class="promoter"
/note="lambda PR promoter"
primer_bind complement(1399..1415)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
terminator 1422..1449
/label=T7Te terminator
/note="phage T7 early transcription terminator"
terminator 1465..1536
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
CDS complement(1551..2264)
/codon_start=1
/product="lambda cI repressor (temperature sensitive)"
/label=lambda cI repressor
/protein_id="AXN69964.1"
/translation="MSTKKKPLTQEQLEDARRLKAIYEKKKNELGLSQESVADKMGMGQ
SGVGALFNGINALNAYNAALLAKILKVSVEEFSPSIAREIYEMYEAVSMQPSLRSEYEY
PVFSHVQAGMFSPKLRTFTKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPD
GMLILVDPEQAVEPGDFCIARLGGDEFTFKKLIRDSGQVFLQPLNPQYPMIPCNESCSV
VGEVIASQWPEETFG"
promoter complement(2307..2591)
/gene="araBAD"
/label=araBAD promoter
/note="promoter of the L-arabinose operon of E. coli; the
araC regulatory gene is transcribed in the opposite
direction (Guzman et al., 1995)"
regulatory complement(2307..2341)
/regulatory_class="promoter"
/note="pBAD"
CDS 2618..3496
/codon_start=1
/gene="araC"
/product="arabinose operon regulatory protein"
/label=araC
/protein_id="AXN69965.1"
/translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGY
ILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYW
HEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRR
MEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGIS
VLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE
EKVNDVAVKLS"
gene 2618..3496
/gene="araC"
/label=araC
promoter 3718..3822
/gene="bla"
/label=AmpR promoter
CDS 3823..4683
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/protein_id="AXN69966.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 3823..4683
/gene="bla"
/label=bla