Koch R, Ledermann R, Urwyler O, Heller M, Suter B.
pw+SNattB 载体载体图谱
pw+SNattB 载体载体序列
LOCUS Exported 7517 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transformation vector pw+SNattB, complete sequence.
ACCESSION EU729722
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7517)
AUTHORS Koch R, Ledermann R, Urwyler O, Heller M, Suter B.
TITLE Systematic functional analysis of Bicaudal-D serine phosphorylation
and intragenic suppression of a female sterile allele of BicD
JOURNAL PLoS ONE 4 (2), E4552 (2009)
PUBMED 19234596
REFERENCE 2 (bases 1 to 7517)
AUTHORS Koch R, Ledermann R, Urwyler O, Heller M, Suter B.
TITLE Direct Submission
JOURNAL Submitted (19-MAY-2008) Institute for Cell Biology, University of
Berne, Baltzerstrasse 4, Bern 3012, Switzerland
REFERENCE 3 (bases 1 to 7517)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7517
/organism="Transformation vector pw+SNattB"
/mol_type="other DNA"
/db_xref="taxon:538401"
rep_origin 4..459
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 623..641
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 667..4802
/label=w+ dominant eye marker
/note="w+ dominant eye marker"
CDS join(1145..1216,1618..1891,1966..2620,2682..2997,3218..3349,
3420..4034)
/codon_start=1
/gene="white"
/product="Drosophila white gene eye color pigment"
/label=mini-white
/note="This ia a modified version of the white gene lacking
part of the first intron."
/translation="MGQEDQELLIRGGSKHPSAEHLNNGDSGAASQSCINQGFGQAKNY
GTLRPPSPPEDSGSGSGQLAENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERH
IPAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNG
QPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQEL
SLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQ
VLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCP
TNYNPADFYVQVLAVVPGREIESRDRIAKICDNFAISKVARDMEQLLATKNLEKPLEQP
ENGYTYKATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVG
VMNINGAIFLFLTNMTFQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPL
FLTVPLVFTAIAYPMIGLRAGVLHFFNCLALVTLVANVSTSFGYLISCASSSTSMALSV
GPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVEPGEISCTSS
NTTCPSSGKVILETLNFSAADLPLDYVGLAILIVSFRVLAYLALRLRARRKE"
misc_feature 4809..4842
/label=loxP
/note="loxP"
protein_bind complement(4809..4842)
/label=loxP
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
misc_feature 4857..5005
/label=multiple cloning site
/note="multiple cloning site"
misc_feature 5020..5304
/label=attB site
/note="attB site"
protein_bind 5041..5110
/label=attB
/bound_moiety="phage phi-C31 integrase"
/note="attB site for the phi-C31 integrase (Groth et al.,
2000)"
promoter complement(5329..5347)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(5368..5384)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 5392..5408
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(5416..5446)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5461..5482
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(5770..6358)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(6529..7389)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(7390..7494)
/gene="bla"
/label=AmpR promoter
Koch R, Ledermann R, Urwyler O, Heller M, Suter B.
pw+SNattB 载体载体图谱
pw+SNattB 载体载体序列
LOCUS Exported 7517 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transformation vector pw+SNattB, complete sequence.
ACCESSION EU729722
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7517)
AUTHORS Koch R, Ledermann R, Urwyler O, Heller M, Suter B.
TITLE Systematic functional analysis of Bicaudal-D serine phosphorylation
and intragenic suppression of a female sterile allele of BicD
JOURNAL PLoS ONE 4 (2), E4552 (2009)
PUBMED 19234596
REFERENCE 2 (bases 1 to 7517)
AUTHORS Koch R, Ledermann R, Urwyler O, Heller M, Suter B.
TITLE Direct Submission
JOURNAL Submitted (19-MAY-2008) Institute for Cell Biology, University of
Berne, Baltzerstrasse 4, Bern 3012, Switzerland
REFERENCE 3 (bases 1 to 7517)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7517
/organism="Transformation vector pw+SNattB"
/mol_type="other DNA"
/db_xref="taxon:538401"
rep_origin 4..459
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 623..641
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 667..4802
/label=w+ dominant eye marker
/note="w+ dominant eye marker"
CDS join(1145..1216,1618..1891,1966..2620,2682..2997,3218..3349,
3420..4034)
/codon_start=1
/gene="white"
/product="Drosophila white gene eye color pigment"
/label=mini-white
/note="This ia a modified version of the white gene lacking
part of the first intron."
/translation="MGQEDQELLIRGGSKHPSAEHLNNGDSGAASQSCINQGFGQAKNY
GTLRPPSPPEDSGSGSGQLAENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERH
IPAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNG
QPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQEL
SLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQ
VLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCP
TNYNPADFYVQVLAVVPGREIESRDRIAKICDNFAISKVARDMEQLLATKNLEKPLEQP
ENGYTYKATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVG
VMNINGAIFLFLTNMTFQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPL
FLTVPLVFTAIAYPMIGLRAGVLHFFNCLALVTLVANVSTSFGYLISCASSSTSMALSV
GPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVEPGEISCTSS
NTTCPSSGKVILETLNFSAADLPLDYVGLAILIVSFRVLAYLALRLRARRKE"
misc_feature 4809..4842
/label=loxP
/note="loxP"
protein_bind complement(4809..4842)
/label=loxP
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
misc_feature 4857..5005
/label=multiple cloning site
/note="multiple cloning site"
misc_feature 5020..5304
/label=attB site
/note="attB site"
protein_bind 5041..5110
/label=attB
/bound_moiety="phage phi-C31 integrase"
/note="attB site for the phi-C31 integrase (Groth et al.,
2000)"
promoter complement(5329..5347)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(5368..5384)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 5392..5408
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(5416..5446)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5461..5482
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(5770..6358)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(6529..7389)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(7390..7494)
/gene="bla"
/label=AmpR promoter