LOCUS Exported 6607 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pVLG6, complete sequence.
ACCESSION JF812998
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6607)
AUTHORS Zeigler DR.
TITLE Sequence of pVLG6, a shuttle vector for constructing GFP fusions in
Bacillus megaterium and other Gram-positive bacteria
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6607)
AUTHORS Zeigler DR.
TITLE Direct Submission
JOURNAL Submitted (18-APR-2011) Bacillus Genetic Stock Center, The Ohio
State University, 484 W 12th Ave, Columbus, OH 43210, USA
REFERENCE 3 (bases 1 to 6607)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6607
/organism="Cloning vector pVLG6"
/mol_type="other DNA"
/note="plasmid depositied in Bacillus Genetic Stock Center
by V. Lukyanchuk and P. S. Vary, Northern Illinois
University"
/db_xref="taxon:1086586"
primer_bind 18..34
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
CDS 61..777
/codon_start=1
/product="GFPmut1"
/label=GFPmut1
/note="green fluorescent protein; enhanced fluorescence GFP
at 488 nm"
/protein_id="AEP13835.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLSPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
primer_bind complement(792..808)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
CDS 1202..1387
/codon_start=1
/gene="cop"
/product="Cop"
/label=cop
/note="copy control regulatory protein for Gram-positive
replication"
/protein_id="AEP13839.1"
/translation="MLGGTVMVVDRKEEKKVAVTLRLTTEENEILNRIKEKYNISKSDA
TGILIKKYAKEEYGAF"
gene 1202..1387
/gene="cop"
/label=cop
CDS 1468..2067
/codon_start=1
/gene="repF"
/product="RepF"
/label=repF
/note="initiation protein for Gram-positive replication"
/protein_id="AEP13838.1"
/translation="MSENVIKETENKKNSRGRNWTFVLYPESAKAEWLEYLKELHIQFV
VSPLHDRDTDTEGRMKKEHYHILVMYEGNKSYEQIKIITEELNATIPQIAGSVKGLVRY
MLHMDDPNKFKYQKEDMIVYGGVDVDELLKKTTTDRYKLIKEMIEFIDEQGIVEFKSLM
DYAMKFKFDDWFPLLCDNSAYVIQEYIKSNRYKSDR"
gene 1468..2067
/gene="repF"
/label=repF
promoter complement(2703..2721)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(2728..2744)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin complement(2885..3340)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 3367..3471
/gene="bla"
/label=AmpR promoter
CDS 3472..4332
/codon_start=1
/gene="bla"
/product="Bla"
/label=bla
/note="beta-lactamase; ampicillin resistance"
/protein_id="AEP13837.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 3472..4332
/gene="bla"
/label=bla
rep_origin 4503..5091
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5455..6105)
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=cat
/note="chloramphenicol resistance"
/protein_id="AEP13836.1"
/translation="MNFNKIDLDNWKRKEIFNHYLNQQTTFSITTEIDISVLYRNIKQE
GYKFYPAFIFLVTRVINSNTAFRTGYNSDGELGYWDKLEPLYTIFDGVSKTFSGIWTPV
KNDFKEFYDLYLSDVEKYNGSGKLFPKTPIPENAFSLSIIPWTSFTGFNLNINNNSNYL
LPIITAGKFINKGNSIYLPLSLQVHHSVCDGYHAGLFMNSIQELSDRPNDWLL"
gene complement(5455..6105)
/gene="cat"
/label=cat
protein_bind 6443..6464
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 6479..6509
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 6517..6533
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 6541..6557
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 6578..6596
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
LOCUS Exported 6607 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pVLG6, complete sequence.
ACCESSION JF812998
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6607)
AUTHORS Zeigler DR.
TITLE Sequence of pVLG6, a shuttle vector for constructing GFP fusions in
Bacillus megaterium and other Gram-positive bacteria
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6607)
AUTHORS Zeigler DR.
TITLE Direct Submission
JOURNAL Submitted (18-APR-2011) Bacillus Genetic Stock Center, The Ohio
State University, 484 W 12th Ave, Columbus, OH 43210, USA
REFERENCE 3 (bases 1 to 6607)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6607
/organism="Cloning vector pVLG6"
/mol_type="other DNA"
/note="plasmid depositied in Bacillus Genetic Stock Center
by V. Lukyanchuk and P. S. Vary, Northern Illinois
University"
/db_xref="taxon:1086586"
primer_bind 18..34
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
CDS 61..777
/codon_start=1
/product="GFPmut1"
/label=GFPmut1
/note="green fluorescent protein; enhanced fluorescence GFP
at 488 nm"
/protein_id="AEP13835.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLSPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
primer_bind complement(792..808)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
CDS 1202..1387
/codon_start=1
/gene="cop"
/product="Cop"
/label=cop
/note="copy control regulatory protein for Gram-positive
replication"
/protein_id="AEP13839.1"
/translation="MLGGTVMVVDRKEEKKVAVTLRLTTEENEILNRIKEKYNISKSDA
TGILIKKYAKEEYGAF"
gene 1202..1387
/gene="cop"
/label=cop
CDS 1468..2067
/codon_start=1
/gene="repF"
/product="RepF"
/label=repF
/note="initiation protein for Gram-positive replication"
/protein_id="AEP13838.1"
/translation="MSENVIKETENKKNSRGRNWTFVLYPESAKAEWLEYLKELHIQFV
VSPLHDRDTDTEGRMKKEHYHILVMYEGNKSYEQIKIITEELNATIPQIAGSVKGLVRY
MLHMDDPNKFKYQKEDMIVYGGVDVDELLKKTTTDRYKLIKEMIEFIDEQGIVEFKSLM
DYAMKFKFDDWFPLLCDNSAYVIQEYIKSNRYKSDR"
gene 1468..2067
/gene="repF"
/label=repF
promoter complement(2703..2721)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(2728..2744)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin complement(2885..3340)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 3367..3471
/gene="bla"
/label=AmpR promoter
CDS 3472..4332
/codon_start=1
/gene="bla"
/product="Bla"
/label=bla
/note="beta-lactamase; ampicillin resistance"
/protein_id="AEP13837.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 3472..4332
/gene="bla"
/label=bla
rep_origin 4503..5091
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5455..6105)
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=cat
/note="chloramphenicol resistance"
/protein_id="AEP13836.1"
/translation="MNFNKIDLDNWKRKEIFNHYLNQQTTFSITTEIDISVLYRNIKQE
GYKFYPAFIFLVTRVINSNTAFRTGYNSDGELGYWDKLEPLYTIFDGVSKTFSGIWTPV
KNDFKEFYDLYLSDVEKYNGSGKLFPKTPIPENAFSLSIIPWTSFTGFNLNINNNSNYL
LPIITAGKFINKGNSIYLPLSLQVHHSVCDGYHAGLFMNSIQELSDRPNDWLL"
gene complement(5455..6105)
/gene="cat"
/label=cat
protein_bind 6443..6464
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 6479..6509
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 6517..6533
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 6541..6557
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 6578..6596
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"