LOCUS Exported 3430 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pVCDcDL1, complete sequence.
ACCESSION AY190049
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3430)
AUTHORS Gupta A, Onda M, Pastan I, Adhya S, Chaudhary VK.
TITLE High-density functional display of proteins on bacteriophage lambda
JOURNAL J. Mol. Biol. 334 (2), 241-254 (2003)
PUBMED 14607116
REFERENCE 2 (bases 1 to 3430)
AUTHORS Gupta A, Chaudhary VK.
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2002) Biochemistry, University of Delhi South
Campus, Benito Juarez Road, New Delhi 110021, India
REFERENCE 3 (bases 1 to 3430)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3430
/organism="Cloning vector pVCDcDL1"
/mol_type="other DNA"
/db_xref="taxon:221908"
protein_bind 107..128
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 143..173
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 181..197
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 205..221
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 667..696
/codon_start=1
/product="Myc (human c-Myc proto-oncogene) epitope tag"
/label=Myc
/translation="EQKLISEEDL"
protein_bind complement(715..748)
/label=loxP
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
rep_origin 749..1176
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
protein_bind 1194..1227
/label=loxP511
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GTATACAT). loxP511 sites are compatible with each
other, but incompatible with wild-type loxP sites."
promoter 1525..1629
/gene="bla"
/label=AmpR promoter
CDS 1630..2490
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/protein_id="AAO48715.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 1630..2490
/gene="bla"
/label=bla
rep_origin 2661..3249
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
LOCUS Exported 3430 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pVCDcDL1, complete sequence.
ACCESSION AY190049
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3430)
AUTHORS Gupta A, Onda M, Pastan I, Adhya S, Chaudhary VK.
TITLE High-density functional display of proteins on bacteriophage lambda
JOURNAL J. Mol. Biol. 334 (2), 241-254 (2003)
PUBMED 14607116
REFERENCE 2 (bases 1 to 3430)
AUTHORS Gupta A, Chaudhary VK.
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2002) Biochemistry, University of Delhi South
Campus, Benito Juarez Road, New Delhi 110021, India
REFERENCE 3 (bases 1 to 3430)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3430
/organism="Cloning vector pVCDcDL1"
/mol_type="other DNA"
/db_xref="taxon:221908"
protein_bind 107..128
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 143..173
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 181..197
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 205..221
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 667..696
/codon_start=1
/product="Myc (human c-Myc proto-oncogene) epitope tag"
/label=Myc
/translation="EQKLISEEDL"
protein_bind complement(715..748)
/label=loxP
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
rep_origin 749..1176
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
protein_bind 1194..1227
/label=loxP511
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GTATACAT). loxP511 sites are compatible with each
other, but incompatible with wild-type loxP sites."
promoter 1525..1629
/gene="bla"
/label=AmpR promoter
CDS 1630..2490
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/protein_id="AAO48715.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 1630..2490
/gene="bla"
/label=bla
rep_origin 2661..3249
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"