LOCUS Exported 6679 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pVC7N DNA, complete sequence.
ACCESSION LC425431
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6679)
AUTHORS Hashiro S, Yasueda H.
TITLE High copy number mutants derived from Corynebacterium glutamicum
cryptic plasmid pAM330 and copy number control
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6679)
AUTHORS Hashiro S, Yasueda H.
TITLE Direct Submission
JOURNAL Submitted (19-SEP-2018) Contact:Shuhei Hashiro AJINOMOTO CO., INC.,
Frontier Research Labs. Institute For Innovation; 1-1 Suzuki-Cho,
Kawasaki-Ku, Kawasaki, Kanagawa 210-8681, Japan URL
:http://www.ajinomoto.com/
REFERENCE 3 (bases 1 to 6679)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6679
/organism="Cloning vector pVC7N"
/mol_type="other DNA"
/note="pVC7N was constructed by ligating a cryptic plasmid
of Corynebacterium glutamicum, pAM330N, to a vector for
Escherichia Coli, pHSG399"
/db_xref="taxon:2382093"
misc_feature 1..4451
/label=pAM330N region
/note="pAM330N region"
CDS 1215..2600
/codon_start=1
/gene="repA"
/label=repA
/protein_id="BBG56731.1"
/translation="MTTIALAKTTGTTPAQTRTAQPRTTSGLGNTEIEVNTSKEPQVNE
GSKVTRARAWRRQNVMYKITNSKALAGCHRWRRDEAVAVSWSSNGASQFEGLQNSHSRW
GSPLAELEVMGERRIELAIATKNHLAAGGALMMFVGTVRHNRSQSFAQVEAGIKTAYSS
MVKTSQWKKERARYGVEHTYSDYEVTDSWANGWHLHRNMLLFLDRPLSDDELKAFEDSM
FSRWSAGVVKAGMDAPLREHGVKLDQVSTWGGDAAKMATYLAKGMSQELTGSATKTASK
GSYTPFQMLDMLADQSDAGEDMDAVLVARWREYEVGSKNLRSSWSRGAKRALGIDYIDA
DVRREMEEELYKLAGLEAPERVESTRVAVALVKPDDWKLIQSDFAVRQYVLDCVDKAKD
VAAAQRVANEVLASLGVDSTPCMIVMDDVDLDAVLPTHGDATKRDLNAAVFAGNEQTIL
RTH"
gene 1215..2600
/gene="repA"
/label=repA
misc_feature 4452..6679
/label=pHSG399 region
/note="pHSG399 region"
CDS 4545..5204
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=cat
/protein_id="BBG56732.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene 4545..5204
/gene="cat"
/label=cat
protein_bind 5413..5434
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 5449..5479
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5487..5503
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 5511..5527
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 5523..5753
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPSLHACRSTLEDPRVPSSNSLAVVLQRRDWENPGVTQLNR
LAAHPPFASWRNSEEARTDRPSQQLRSLNGE"
misc_feature 5540..5596
/label=MCS
/note="pUC18/19 multiple cloning site"
primer_bind complement(5597..5613)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin complement(5939..6527)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
LOCUS Exported 6679 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pVC7N DNA, complete sequence.
ACCESSION LC425431
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6679)
AUTHORS Hashiro S, Yasueda H.
TITLE High copy number mutants derived from Corynebacterium glutamicum
cryptic plasmid pAM330 and copy number control
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6679)
AUTHORS Hashiro S, Yasueda H.
TITLE Direct Submission
JOURNAL Submitted (19-SEP-2018) Contact:Shuhei Hashiro AJINOMOTO CO., INC.,
Frontier Research Labs. Institute For Innovation; 1-1 Suzuki-Cho,
Kawasaki-Ku, Kawasaki, Kanagawa 210-8681, Japan URL
:http://www.ajinomoto.com/
REFERENCE 3 (bases 1 to 6679)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6679
/organism="Cloning vector pVC7N"
/mol_type="other DNA"
/note="pVC7N was constructed by ligating a cryptic plasmid
of Corynebacterium glutamicum, pAM330N, to a vector for
Escherichia Coli, pHSG399"
/db_xref="taxon:2382093"
misc_feature 1..4451
/label=pAM330N region
/note="pAM330N region"
CDS 1215..2600
/codon_start=1
/gene="repA"
/label=repA
/protein_id="BBG56731.1"
/translation="MTTIALAKTTGTTPAQTRTAQPRTTSGLGNTEIEVNTSKEPQVNE
GSKVTRARAWRRQNVMYKITNSKALAGCHRWRRDEAVAVSWSSNGASQFEGLQNSHSRW
GSPLAELEVMGERRIELAIATKNHLAAGGALMMFVGTVRHNRSQSFAQVEAGIKTAYSS
MVKTSQWKKERARYGVEHTYSDYEVTDSWANGWHLHRNMLLFLDRPLSDDELKAFEDSM
FSRWSAGVVKAGMDAPLREHGVKLDQVSTWGGDAAKMATYLAKGMSQELTGSATKTASK
GSYTPFQMLDMLADQSDAGEDMDAVLVARWREYEVGSKNLRSSWSRGAKRALGIDYIDA
DVRREMEEELYKLAGLEAPERVESTRVAVALVKPDDWKLIQSDFAVRQYVLDCVDKAKD
VAAAQRVANEVLASLGVDSTPCMIVMDDVDLDAVLPTHGDATKRDLNAAVFAGNEQTIL
RTH"
gene 1215..2600
/gene="repA"
/label=repA
misc_feature 4452..6679
/label=pHSG399 region
/note="pHSG399 region"
CDS 4545..5204
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=cat
/protein_id="BBG56732.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene 4545..5204
/gene="cat"
/label=cat
protein_bind 5413..5434
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 5449..5479
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5487..5503
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 5511..5527
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 5523..5753
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPSLHACRSTLEDPRVPSSNSLAVVLQRRDWENPGVTQLNR
LAAHPPFASWRNSEEARTDRPSQQLRSLNGE"
misc_feature 5540..5596
/label=MCS
/note="pUC18/19 multiple cloning site"
primer_bind complement(5597..5613)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin complement(5939..6527)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"