LOCUS Exported 7055 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transposon delivery vector pUTkm1, complete sequence.
ACCESSION AF102233
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7055)
AUTHORS de Lorenzo V, Herrero M, Jakubzik U, Timmis KN.
TITLE Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter
probing, and chromosomal insertion of cloned DNA in gram-negative
eubacteria
JOURNAL J. Bacteriol. 172 (11), 6568-6572 (1990)
PUBMED 2172217
REFERENCE 2 (bases 1 to 7055)
AUTHORS Tombolini R, Jansson J.
TITLE Direct Submission
JOURNAL Submitted (27-OCT-1998) Department of Biochemistry, Stockholm
University, Svante Arrhenius vag. 10-12, Stockholm SE-10691, Sweden
REFERENCE 3 (bases 1 to 7055)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7055
/organism="Transposon delivery vector pUTkm1"
/mol_type="other DNA"
/db_xref="taxon:84477"
CDS complement(311..1171)
/codon_start=1
/gene="bla"
/product="beta lactamase"
/label=bla
/protein_id="AAC79082.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(311..1171)
/gene="bla"
/label=bla
promoter complement(1172..1276)
/gene="bla"
/label=AmpR promoter
misc_feature 1321..2835
/label=originates from Escherichia coli transposon Tn5
/note="originates from Escherichia coli transposon Tn5"
CDS 3394..4209
/codon_start=1
/product="kanamycin resistance protein"
/label=kanamycin resistance protein
/note="originates from transposon Tn903"
/protein_id="AAC79083.1"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
protein_bind 4718..4734
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
rep_origin 4769..5157
/label=R6K gamma ori
/note="gamma replication origin from E. coli plasmid R6K;
requires the R6K initiator protein pi for replication"
CDS complement(5775..6146)
/codon_start=1
/gene="traJ"
/product="oriT-recognizing protein"
/label=traJ
/translation="MADETKPTRKGSPPIKVYCLPDERRAIEEKAAAAGMSLSAYLLAV
GQGYKITGVVDYEHVRELARINGDLGRLGGLLKLWLTDDPRTARFGDATILALLAKIEE
KQDELGKVMMGVVRPRAEP"
oriT 6179..6288
/note="incP origin of transfer"
LOCUS Exported 7055 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transposon delivery vector pUTkm1, complete sequence.
ACCESSION AF102233
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7055)
AUTHORS de Lorenzo V, Herrero M, Jakubzik U, Timmis KN.
TITLE Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter
probing, and chromosomal insertion of cloned DNA in gram-negative
eubacteria
JOURNAL J. Bacteriol. 172 (11), 6568-6572 (1990)
PUBMED 2172217
REFERENCE 2 (bases 1 to 7055)
AUTHORS Tombolini R, Jansson J.
TITLE Direct Submission
JOURNAL Submitted (27-OCT-1998) Department of Biochemistry, Stockholm
University, Svante Arrhenius vag. 10-12, Stockholm SE-10691, Sweden
REFERENCE 3 (bases 1 to 7055)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7055
/organism="Transposon delivery vector pUTkm1"
/mol_type="other DNA"
/db_xref="taxon:84477"
CDS complement(311..1171)
/codon_start=1
/gene="bla"
/product="beta lactamase"
/label=bla
/protein_id="AAC79082.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(311..1171)
/gene="bla"
/label=bla
promoter complement(1172..1276)
/gene="bla"
/label=AmpR promoter
misc_feature 1321..2835
/label=originates from Escherichia coli transposon Tn5
/note="originates from Escherichia coli transposon Tn5"
CDS 3394..4209
/codon_start=1
/product="kanamycin resistance protein"
/label=kanamycin resistance protein
/note="originates from transposon Tn903"
/protein_id="AAC79083.1"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
protein_bind 4718..4734
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
rep_origin 4769..5157
/label=R6K gamma ori
/note="gamma replication origin from E. coli plasmid R6K;
requires the R6K initiator protein pi for replication"
CDS complement(5775..6146)
/codon_start=1
/gene="traJ"
/product="oriT-recognizing protein"
/label=traJ
/translation="MADETKPTRKGSPPIKVYCLPDERRAIEEKAAAAGMSLSAYLLAV
GQGYKITGVVDYEHVRELARINGDLGRLGGLLKLWLTDDPRTARFGDATILALLAKIEE
KQDELGKVMMGVVRPRAEP"
oriT 6179..6288
/note="incP origin of transfer"