LOCUS Exported 3144 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Universal telomere cap vector pUTC1, complete sequence.
ACCESSION KF192637
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3144)
AUTHORS Annaluru N, Boeke JD.
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2013) Molecular Biology & Genetics, JHU SOM, 733
North Broadway, Baltimore, MD 21205, USA
REFERENCE 2 (bases 1 to 3144)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3144
/organism="Universal telomere cap vector pUTC1"
/mol_type="other DNA"
/db_xref="taxon:1495252"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 408..515
/label=MCS
/note="pBluescript multiple cloning site"
primer_bind 425..441
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(475..491)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
telomere 492..863
/note="Universal Telomere Cap v1.0"
protein_bind complement(522..555)
/label=loxP
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
primer_bind complement(923..939)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 947..963
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(971..1001)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1016..1037
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(1325..1913)
/direction=LEFT
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(2084..2944)
/codon_start=1
/gene="AmpR"
/product="beta-lactamase"
/label=AmpR
/protein_id="AHY28936.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(2084..2944)
/gene="AmpR"
/label=AmpR
promoter complement(2945..3049)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 3144 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Universal telomere cap vector pUTC1, complete sequence.
ACCESSION KF192637
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3144)
AUTHORS Annaluru N, Boeke JD.
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2013) Molecular Biology & Genetics, JHU SOM, 733
North Broadway, Baltimore, MD 21205, USA
REFERENCE 2 (bases 1 to 3144)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3144
/organism="Universal telomere cap vector pUTC1"
/mol_type="other DNA"
/db_xref="taxon:1495252"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 408..515
/label=MCS
/note="pBluescript multiple cloning site"
primer_bind 425..441
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(475..491)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
telomere 492..863
/note="Universal Telomere Cap v1.0"
protein_bind complement(522..555)
/label=loxP
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
primer_bind complement(923..939)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 947..963
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(971..1001)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1016..1037
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(1325..1913)
/direction=LEFT
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(2084..2944)
/codon_start=1
/gene="AmpR"
/product="beta-lactamase"
/label=AmpR
/protein_id="AHY28936.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(2084..2944)
/gene="AmpR"
/label=AmpR
promoter complement(2945..3049)
/gene="bla"
/label=AmpR promoter