LOCUS Exported 3090 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pUK21, complete sequence.
ACCESSION AF223640
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3090)
AUTHORS Vieira J, Messing J.
TITLE New pUC-derived cloning vectors with different selectable markers
and DNA replication origins
JOURNAL Gene 100, 189-194 (1991)
PUBMED 1905257
REFERENCE 2 (bases 1 to 3090)
AUTHORS Vieira J, Messing J.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2000) Waksman Institute, Rutgers University, 190
Frelinghuysen Road, Piscataway, NJ 08854, USA
REFERENCE 3 (bases 1 to 3090)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3090
/organism="Cloning vector pUK21"
/lab_host="Escherichia coli"
/mol_type="genomic DNA"
/db_xref="taxon:119973"
protein_bind 107..128
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
protein_bind 183..199
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 207..223
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 219..659
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPLVRGLEIYRCMPWYPGARIRSFCRRVDVIWIRYRRGGRS
RTSGSIPNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRP
SQQLRSLNGEWRLMRYFLLTHLCGISHRIRQSNHSTRPVAAH"
primer_bind 351..367
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(382..400)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(407..423)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
CDS 1360..2178
/codon_start=1
/gene="kanR"
/product="aminoglycoside 3-phosphotransferase"
/label=kanR
/note="KanR"
/protein_id="AAF71713.1"
/translation="MSHIQRETSCSTRPRLNSNMDADLYGYKWARDNVGQSGATIYRLY
GKPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPG
KTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVD
ASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG
IADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
gene 1360..2178
/gene="kanR"
/label=kanR
rep_origin 2321..2909
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
LOCUS Exported 3090 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pUK21, complete sequence.
ACCESSION AF223640
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3090)
AUTHORS Vieira J, Messing J.
TITLE New pUC-derived cloning vectors with different selectable markers
and DNA replication origins
JOURNAL Gene 100, 189-194 (1991)
PUBMED 1905257
REFERENCE 2 (bases 1 to 3090)
AUTHORS Vieira J, Messing J.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2000) Waksman Institute, Rutgers University, 190
Frelinghuysen Road, Piscataway, NJ 08854, USA
REFERENCE 3 (bases 1 to 3090)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3090
/organism="Cloning vector pUK21"
/lab_host="Escherichia coli"
/mol_type="genomic DNA"
/db_xref="taxon:119973"
protein_bind 107..128
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
protein_bind 183..199
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 207..223
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 219..659
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPLVRGLEIYRCMPWYPGARIRSFCRRVDVIWIRYRRGGRS
RTSGSIPNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRP
SQQLRSLNGEWRLMRYFLLTHLCGISHRIRQSNHSTRPVAAH"
primer_bind 351..367
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(382..400)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(407..423)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
CDS 1360..2178
/codon_start=1
/gene="kanR"
/product="aminoglycoside 3-phosphotransferase"
/label=kanR
/note="KanR"
/protein_id="AAF71713.1"
/translation="MSHIQRETSCSTRPRLNSNMDADLYGYKWARDNVGQSGATIYRLY
GKPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPG
KTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVD
ASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG
IADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
gene 1360..2178
/gene="kanR"
/label=kanR
rep_origin 2321..2909
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"