LOCUS Exported 4453 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transient gene expression vector pUCPMA-M24, complete sequence.
ACCESSION KT388099
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4453)
AUTHORS Maiti IB, Dey N.
TITLE Further characterization and expression analysis of Mirabilis mosaic
caulimovirus (MMV) full-length transcript promoter with single and
double enhancer domains in transgenic plants
JOURNAL Transgenics 3, 61-70 (1999)
REFERENCE 2 (bases 1 to 4453)
AUTHORS Dey N, Maiti IB.
TITLE Structure and promoter/leader deletion analysis of mirabilis mosaic
virus (MMV) full-length transcript promoter in transgenic plants
JOURNAL Plant Mol. Biol. 40 (5), 771-782 (1999)
PUBMED 10487212
REFERENCE 3 (bases 1 to 4453)
AUTHORS Maiti IB, Dey N, Shepherd RJ.
TITLE Use of the full-length transcript (FLt) from Mirabilis mosaic
caulimovirus to express chimeric genes in plants
JOURNAL Patent: US US6420547B1-B 16-JUL-2002;
REFERENCE 4 (bases 1 to 4453)
AUTHORS Maiti IB, Dey N.
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2015) KTRDC, Plant Genetic Engineering Research
and Services, College of Agriculture, University of Kentucky, 1401
University Drive, Lexington, KY 40546, USA
REFERENCE 5 (bases 1 to 4453)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4453
/organism="Transient gene expression vector pUCPMA-M24"
/mol_type="other DNA"
/db_xref="taxon:1781625"
regulatory complement(1..646)
/regulatory_class="polyA_signal_sequence"
/note="rbcSE9 terminator sequence; derived from pea"
terminator 6..647
/label=E9 terminator
/note="terminator and polyadenylation signal from the pea
rbcS-E9 gene"
misc_feature complement(647..692)
/note="multiple cloning site; XbaI-SacI-XhoI-BamHI-HindIII"
regulatory complement(692..1320)
/regulatory_class="promoter"
/note="M24 promoter; derived from Mirabilis mosaic virus
(MMV)"
misc_feature complement(1321..1326)
/label=EcoRI restriction enzyme site
/note="EcoRI restriction enzyme site"
misc_feature 1327..4453
/label=pUC119
/note="pUC119"
primer_bind complement(1327..1343)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 1556..2011
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
regulatory 2268..2397
/regulatory_class="promoter"
/note="ampR promoter"
promoter 2293..2397
/gene="bla"
/label=AmpR promoter
CDS 2398..3258
/codon_start=1
/gene="ampR"
/product="beta-lactamase"
/label=ampR
/note="confers resistance to ampicillin"
/protein_id="AMB51376.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 2398..3258
/gene="ampR"
/label=ampR
regulatory 3259..3417
/regulatory_class="polyA_signal_sequence"
/note="ampR terminator"
rep_origin 3418..4032
/label=ColE1 origin of replication
/note="ColE1 origin of replication"
rep_origin 3429..4017
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 4305..4326
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 4341..4371
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4379..4395
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 4403..4419
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
LOCUS Exported 4453 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transient gene expression vector pUCPMA-M24, complete sequence.
ACCESSION KT388099
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4453)
AUTHORS Maiti IB, Dey N.
TITLE Further characterization and expression analysis of Mirabilis mosaic
caulimovirus (MMV) full-length transcript promoter with single and
double enhancer domains in transgenic plants
JOURNAL Transgenics 3, 61-70 (1999)
REFERENCE 2 (bases 1 to 4453)
AUTHORS Dey N, Maiti IB.
TITLE Structure and promoter/leader deletion analysis of mirabilis mosaic
virus (MMV) full-length transcript promoter in transgenic plants
JOURNAL Plant Mol. Biol. 40 (5), 771-782 (1999)
PUBMED 10487212
REFERENCE 3 (bases 1 to 4453)
AUTHORS Maiti IB, Dey N, Shepherd RJ.
TITLE Use of the full-length transcript (FLt) from Mirabilis mosaic
caulimovirus to express chimeric genes in plants
JOURNAL Patent: US US6420547B1-B 16-JUL-2002;
REFERENCE 4 (bases 1 to 4453)
AUTHORS Maiti IB, Dey N.
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2015) KTRDC, Plant Genetic Engineering Research
and Services, College of Agriculture, University of Kentucky, 1401
University Drive, Lexington, KY 40546, USA
REFERENCE 5 (bases 1 to 4453)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4453
/organism="Transient gene expression vector pUCPMA-M24"
/mol_type="other DNA"
/db_xref="taxon:1781625"
regulatory complement(1..646)
/regulatory_class="polyA_signal_sequence"
/note="rbcSE9 terminator sequence; derived from pea"
terminator 6..647
/label=E9 terminator
/note="terminator and polyadenylation signal from the pea
rbcS-E9 gene"
misc_feature complement(647..692)
/note="multiple cloning site; XbaI-SacI-XhoI-BamHI-HindIII"
regulatory complement(692..1320)
/regulatory_class="promoter"
/note="M24 promoter; derived from Mirabilis mosaic virus
(MMV)"
misc_feature complement(1321..1326)
/label=EcoRI restriction enzyme site
/note="EcoRI restriction enzyme site"
misc_feature 1327..4453
/label=pUC119
/note="pUC119"
primer_bind complement(1327..1343)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 1556..2011
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
regulatory 2268..2397
/regulatory_class="promoter"
/note="ampR promoter"
promoter 2293..2397
/gene="bla"
/label=AmpR promoter
CDS 2398..3258
/codon_start=1
/gene="ampR"
/product="beta-lactamase"
/label=ampR
/note="confers resistance to ampicillin"
/protein_id="AMB51376.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 2398..3258
/gene="ampR"
/label=ampR
regulatory 3259..3417
/regulatory_class="polyA_signal_sequence"
/note="ampR terminator"
rep_origin 3418..4032
/label=ColE1 origin of replication
/note="ColE1 origin of replication"
rep_origin 3429..4017
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 4305..4326
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 4341..4371
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4379..4395
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 4403..4419
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"