LOCUS Exported 3527 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Fluorescent tagging vector pUC57-Ps12-turbo-RFP, complete sequence.
ACCESSION HM150702
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3527)
AUTHORS Norris MH, Kang Y, Hoang TT.
TITLE Stable site-specific fluorescent tagging tools optimized for
burkholderia species
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3527)
AUTHORS Norris MH, Kang Y, Hoang TT.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2010) Microbiology, University of Hawaii at Manoa,
2538 Mccarthy Mall Snyder 310, Honolulu, HI 96822, USA
REFERENCE 3 (bases 1 to 3527)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3527
/organism="Fluorescent tagging vector
pUC57-Ps12-turbo-RFP"
/mol_type="other DNA"
/db_xref="taxon:862778"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
CDS 523..1218
/codon_start=1
/gene="rfp"
/product="monomeric rfp"
/label=rfp
/note="tag-rfp"
/protein_id="ADK12947.1"
/translation="MSELIKENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTMKIKV
VEGGPLPFAFDILATSFMYGSKAFINHTQGIPDFFKQSFPEGFTWERITTYEDGGVLTA
TQDTSFQNGCIIYNVKINGVNFPSNGPVMQKKTRGWEANTEMLYPADGGLRGHSQMALK
LVGGGYLHCSFKTTYRSKKPAKNLKMPGFHFVDHRLERIKEADKETYVEQHEMAVAKYC
DLPSKLGHR"
gene 523..1218
/gene="rfp"
/label=rfp
primer_bind complement(1306..1322)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1330..1346
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1354..1384)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1399..1420
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(1708..2296)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(2467..3327)
/codon_start=1
/gene="bla"
/product="beta lactamase"
/label=bla
/protein_id="ADK12948.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(2467..3327)
/gene="bla"
/label=bla
promoter complement(3328..3432)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 3527 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Fluorescent tagging vector pUC57-Ps12-turbo-RFP, complete sequence.
ACCESSION HM150702
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3527)
AUTHORS Norris MH, Kang Y, Hoang TT.
TITLE Stable site-specific fluorescent tagging tools optimized for
burkholderia species
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3527)
AUTHORS Norris MH, Kang Y, Hoang TT.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2010) Microbiology, University of Hawaii at Manoa,
2538 Mccarthy Mall Snyder 310, Honolulu, HI 96822, USA
REFERENCE 3 (bases 1 to 3527)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3527
/organism="Fluorescent tagging vector
pUC57-Ps12-turbo-RFP"
/mol_type="other DNA"
/db_xref="taxon:862778"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
CDS 523..1218
/codon_start=1
/gene="rfp"
/product="monomeric rfp"
/label=rfp
/note="tag-rfp"
/protein_id="ADK12947.1"
/translation="MSELIKENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTMKIKV
VEGGPLPFAFDILATSFMYGSKAFINHTQGIPDFFKQSFPEGFTWERITTYEDGGVLTA
TQDTSFQNGCIIYNVKINGVNFPSNGPVMQKKTRGWEANTEMLYPADGGLRGHSQMALK
LVGGGYLHCSFKTTYRSKKPAKNLKMPGFHFVDHRLERIKEADKETYVEQHEMAVAKYC
DLPSKLGHR"
gene 523..1218
/gene="rfp"
/label=rfp
primer_bind complement(1306..1322)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1330..1346
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1354..1384)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1399..1420
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(1708..2296)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(2467..3327)
/codon_start=1
/gene="bla"
/product="beta lactamase"
/label=bla
/protein_id="ADK12948.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(2467..3327)
/gene="bla"
/label=bla
promoter complement(3328..3432)
/gene="bla"
/label=AmpR promoter