LOCUS Exported 3128 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pUC21deltaBB, complete sequence.
ACCESSION AF324723
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3128)
AUTHORS Voth WP, Richards JD, Shaw JM, Stillman DJ.
TITLE Yeast vectors for integration at the HO locus
JOURNAL Nucleic Acids Res. 29 (12), E59 (2001)
PUBMED 11410682
REFERENCE 2 (bases 1 to 3128)
AUTHORS Voth WP, Stillman DJ.
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2000) Pathology, University of Utah, 50 N. Medical
Drive, 5C124 SOM, Salt Lake City, UT 84132, USA
REFERENCE 3 (bases 1 to 3128)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3128
/organism="Cloning vector pUC21deltaBB"
/mol_type="genomic DNA"
/note="derived from Cloning vector pUC21 by deletion of the
BamHI-BglII fragment"
/db_xref="taxon:153595"
CDS 1..369
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPLVRGLEIRYRRGGRSRTSGSIPNSPYSESYYNSLAVVLQ
RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCG
ISHRIRQSNHSTRPVAAH"
primer_bind 61..77
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(92..110)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(117..133)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 1005..1109
/gene="bla"
/label=AmpR promoter
CDS 1110..1970
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 2141..2729
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 3017..3038
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
protein_bind 3093..3109
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 3117..5
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
LOCUS Exported 3128 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pUC21deltaBB, complete sequence.
ACCESSION AF324723
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3128)
AUTHORS Voth WP, Richards JD, Shaw JM, Stillman DJ.
TITLE Yeast vectors for integration at the HO locus
JOURNAL Nucleic Acids Res. 29 (12), E59 (2001)
PUBMED 11410682
REFERENCE 2 (bases 1 to 3128)
AUTHORS Voth WP, Stillman DJ.
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2000) Pathology, University of Utah, 50 N. Medical
Drive, 5C124 SOM, Salt Lake City, UT 84132, USA
REFERENCE 3 (bases 1 to 3128)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3128
/organism="Cloning vector pUC21deltaBB"
/mol_type="genomic DNA"
/note="derived from Cloning vector pUC21 by deletion of the
BamHI-BglII fragment"
/db_xref="taxon:153595"
CDS 1..369
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPLVRGLEIRYRRGGRSRTSGSIPNSPYSESYYNSLAVVLQ
RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCG
ISHRIRQSNHSTRPVAAH"
primer_bind 61..77
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(92..110)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(117..133)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 1005..1109
/gene="bla"
/label=AmpR promoter
CDS 1110..1970
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 2141..2729
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 3017..3038
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
protein_bind 3093..3109
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 3117..5
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"