Choi KH, Mima T, Casart Y, Rholl D, Kumar A, Beacham IR, Schweizer HP.
pUC18T-mini-Tn7T-LAC-Gm 载体载体图谱
pUC18T-mini-Tn7T-LAC-Gm 载体载体序列
LOCUS Exported 6047 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pUC18T-mini-Tn7T-LAC-Gm, complete sequence.
ACCESSION EU240902
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6047)
AUTHORS Choi KH, Mima T, Casart Y, Rholl D, Kumar A, Beacham IR, Schweizer
HP.
TITLE Genetic tools for select-agent-compliant manipulation of
Burkholderia pseudomallei
JOURNAL Appl. Environ. Microbiol. 74 (4), 1064-1075 (2008)
PUBMED 18156318
REFERENCE 2 (bases 1 to 6047)
AUTHORS Choi K-H., Schweizer HP.
TITLE Genetic tools for Pseudomonas and its related bacteria
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 6047)
AUTHORS Choi K-H., Schweizer HP.
TITLE Direct Submission
JOURNAL Submitted (23-OCT-2007) Microbiology, Immunology and Pathology,
Colorado State University, 1682 Campus delivery, Ft. Collins, CO
80523, USA
REFERENCE 4 (bases 1 to 6047)
AUTHORS Choi K-H., Schweizer HP.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2010) Microbiology, Immunology and Pathology,
Colorado State University, 1682 Campus delivery, Ft. Collins, CO
80523, USA
REFERENCE 5 (bases 1 to 6047)
AUTHORS .
TITLE Direct Submission
COMMENT On May 25, 2010 this sequence version replaced EU240902.1.
FEATURES Location/Qualifiers
source 1..6047
/organism="Expression vector pUC18T-mini-Tn7T-LAC-Gm"
/mol_type="other DNA"
/db_xref="taxon:483254"
repeat_region 382..580
/label=right end of Tn7
/note="right end of Tn7"
primer_bind 585..601
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
regulatory 629..723
/regulatory_class="terminator"
/note="bacteriophage lambda T0"
terminator 629..723
/label=lambda t0 terminator
/note="transcription terminator from phage lambda"
regulatory 820..917
/regulatory_class="terminator"
/note="Escherichia coli rrnB T1"
terminator 826..912
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
misc_feature 958..1005
/note="FRT; Flp recombinase target site"
protein_bind 958..1005
/label=FRT
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="FLP-mediated recombination occurs in the 8-bp core
sequence TCTAGAAA (Turan and Bode, 2011)."
CDS complement(1135..1668)
/codon_start=1
/gene="aacC1"
/product="gentamycin acetyl transferase"
/label=aacC1
/protein_id="ABX52091.1"
/translation="MLRSSNDVTQQGSRPKTKLGGSSMGIIRTCRLGPDQVKSMRAALD
LFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRS
EIYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLGIR
EEVMHFDIDPSTAT"
gene complement(1135..1668)
/gene="aacC1"
/label=aacC1
promoter complement(1857..1885)
/gene="intI1 (promoter lies within the coding sequence)"
/label=Pc promoter
/note="class 1 integron promoter"
misc_feature 1926..1973
/note="FRT; Flp recombinase target site"
protein_bind 1926..1973
/label=FRT
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="FLP-mediated recombination occurs in the 8-bp core
sequence TCTAGAAA (Turan and Bode, 2011)."
gene complement(2016..3164)
/gene="lacI"
/label=lacI
CDS complement(2016..3098)
/codon_start=1
/gene="lacI"
/product="Lac repressor"
/label=lacI
/protein_id="ABX52092.1"
/translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL
NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV
EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
YIPPSTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
ALADSLMQLARQVSRLESGQ"
promoter complement(3099..3176)
/gene="lacI (mutant)"
/label=lacIq promoter
/note="In the lacIq allele, a single base change in the
promoter boosts expression of the lacI gene about 10-fold."
regulatory complement(3134..3164)
/regulatory_class="promoter"
/gene="lacI"
/note="lacI promoter region with lacIQ promoter-up"
promoter 3406..3434
/label=tac promoter
/note="strong E. coli promoter; hybrid between the trp and
lac UV5 promoters"
regulatory 3406..3433
/regulatory_class="promoter"
/note="tac"
protein_bind 3440..3460
/label=LacI binding site
/bound_moiety="LacI"
/note="lac operator"
protein_bind 3442..3458
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
misc_feature 3475..3555
/note="MCS; multiple cloning site"
repeat_region 3564..3729
/label=left end of Tn7
/note="left end of Tn7"
mobile_element 3564..3729
/mobile_element_type="transposon:Tn7"
/note="mini-Tn7 element (left end of the Tn7 transposon)"
rep_origin 3881..4148
/note="oriT; origin of conjugal transfer"
oriT 3888..3996
/note="incP origin of transfer"
rep_origin complement(4228..4816)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4987..5847)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/protein_id="ABX52093.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(4987..5847)
/gene="bla"
/label=bla
promoter complement(5848..5952)
/gene="bla"
/label=AmpR promoter
Choi KH, Mima T, Casart Y, Rholl D, Kumar A, Beacham IR, Schweizer HP.
pUC18T-mini-Tn7T-LAC-Gm 载体载体图谱
pUC18T-mini-Tn7T-LAC-Gm 载体载体序列
LOCUS Exported 6047 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pUC18T-mini-Tn7T-LAC-Gm, complete sequence.
ACCESSION EU240902
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6047)
AUTHORS Choi KH, Mima T, Casart Y, Rholl D, Kumar A, Beacham IR, Schweizer
HP.
TITLE Genetic tools for select-agent-compliant manipulation of
Burkholderia pseudomallei
JOURNAL Appl. Environ. Microbiol. 74 (4), 1064-1075 (2008)
PUBMED 18156318
REFERENCE 2 (bases 1 to 6047)
AUTHORS Choi K-H., Schweizer HP.
TITLE Genetic tools for Pseudomonas and its related bacteria
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 6047)
AUTHORS Choi K-H., Schweizer HP.
TITLE Direct Submission
JOURNAL Submitted (23-OCT-2007) Microbiology, Immunology and Pathology,
Colorado State University, 1682 Campus delivery, Ft. Collins, CO
80523, USA
REFERENCE 4 (bases 1 to 6047)
AUTHORS Choi K-H., Schweizer HP.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2010) Microbiology, Immunology and Pathology,
Colorado State University, 1682 Campus delivery, Ft. Collins, CO
80523, USA
REFERENCE 5 (bases 1 to 6047)
AUTHORS .
TITLE Direct Submission
COMMENT On May 25, 2010 this sequence version replaced EU240902.1.
FEATURES Location/Qualifiers
source 1..6047
/organism="Expression vector pUC18T-mini-Tn7T-LAC-Gm"
/mol_type="other DNA"
/db_xref="taxon:483254"
repeat_region 382..580
/label=right end of Tn7
/note="right end of Tn7"
primer_bind 585..601
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
regulatory 629..723
/regulatory_class="terminator"
/note="bacteriophage lambda T0"
terminator 629..723
/label=lambda t0 terminator
/note="transcription terminator from phage lambda"
regulatory 820..917
/regulatory_class="terminator"
/note="Escherichia coli rrnB T1"
terminator 826..912
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
misc_feature 958..1005
/note="FRT; Flp recombinase target site"
protein_bind 958..1005
/label=FRT
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="FLP-mediated recombination occurs in the 8-bp core
sequence TCTAGAAA (Turan and Bode, 2011)."
CDS complement(1135..1668)
/codon_start=1
/gene="aacC1"
/product="gentamycin acetyl transferase"
/label=aacC1
/protein_id="ABX52091.1"
/translation="MLRSSNDVTQQGSRPKTKLGGSSMGIIRTCRLGPDQVKSMRAALD
LFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRS
EIYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLGIR
EEVMHFDIDPSTAT"
gene complement(1135..1668)
/gene="aacC1"
/label=aacC1
promoter complement(1857..1885)
/gene="intI1 (promoter lies within the coding sequence)"
/label=Pc promoter
/note="class 1 integron promoter"
misc_feature 1926..1973
/note="FRT; Flp recombinase target site"
protein_bind 1926..1973
/label=FRT
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="FLP-mediated recombination occurs in the 8-bp core
sequence TCTAGAAA (Turan and Bode, 2011)."
gene complement(2016..3164)
/gene="lacI"
/label=lacI
CDS complement(2016..3098)
/codon_start=1
/gene="lacI"
/product="Lac repressor"
/label=lacI
/protein_id="ABX52092.1"
/translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL
NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV
EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
YIPPSTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
ALADSLMQLARQVSRLESGQ"
promoter complement(3099..3176)
/gene="lacI (mutant)"
/label=lacIq promoter
/note="In the lacIq allele, a single base change in the
promoter boosts expression of the lacI gene about 10-fold."
regulatory complement(3134..3164)
/regulatory_class="promoter"
/gene="lacI"
/note="lacI promoter region with lacIQ promoter-up"
promoter 3406..3434
/label=tac promoter
/note="strong E. coli promoter; hybrid between the trp and
lac UV5 promoters"
regulatory 3406..3433
/regulatory_class="promoter"
/note="tac"
protein_bind 3440..3460
/label=LacI binding site
/bound_moiety="LacI"
/note="lac operator"
protein_bind 3442..3458
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
misc_feature 3475..3555
/note="MCS; multiple cloning site"
repeat_region 3564..3729
/label=left end of Tn7
/note="left end of Tn7"
mobile_element 3564..3729
/mobile_element_type="transposon:Tn7"
/note="mini-Tn7 element (left end of the Tn7 transposon)"
rep_origin 3881..4148
/note="oriT; origin of conjugal transfer"
oriT 3888..3996
/note="incP origin of transfer"
rep_origin complement(4228..4816)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4987..5847)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/protein_id="ABX52093.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(4987..5847)
/gene="bla"
/label=bla
promoter complement(5848..5952)
/gene="bla"
/label=AmpR promoter