LOCUS Exported 9626 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pUAST-NTAP(GS), complete sequence.
ACCESSION EU663572
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9626)
AUTHORS Kyriakakis P, Tipping M, Abed L, Veraksa A.
TITLE Tandem affinity purification in Drosophila: The advantages of the
GS-TAP system
JOURNAL Fly (Austin) 2 (4) (2008) In press
PUBMED 18719405
REFERENCE 2 (bases 1 to 9626)
AUTHORS Veraksa A, Kyriakakis P, Tipping M, Abed L.
TITLE Direct Submission
JOURNAL Submitted (20-APR-2008) Biology Department, University of
Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125, USA
REFERENCE 3 (bases 1 to 9626)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..9626
/organism="Cloning vector pUAST-NTAP(GS)"
/mol_type="other DNA"
/note="mammalian GS-TAP vectors were originally described
in the following publication: Burckstummer T. et al. (2006)
Nature Methods 3, 1013-1019; designed for protein fusions
with the GS-TAP tag and inducible expression in transgenic
Drosophila; orientation is reversed relative to the
compiled sequence of pUAST in FlyBase"
/db_xref="taxon:546946"
rep_origin complement(235..823)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(994..1854)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(1855..1959)
/gene="bla"
/label=AmpR promoter
misc_feature 2761..2993
/label=P element 3 end
/note="P element 3 end"
protein_bind 3055..3149
/label=5X UAS
/bound_moiety="GAL4"
/note="five tandem copies of the ""ScaI site"" 17-mer
CGGAGTACTGTCCTCCG, an upstream activating sequence (UAS)
that efficiently binds yeast Gal4 (Webster et al., 1988;
Pfeiffer et al., 2010)"
promoter 3168..3406
/label=hsp70 promoter
/note="Drosophila melanogaster hsp70Bb promoter"
CDS 3431..3976
/codon_start=1
/product="NTAP(GS) tag"
/label=NTAP
/protein_id="ACF35722.1"
/translation="MGTPAVTTYKLVINGKTLKGETTTKAVDAETAEKAFKQYANDNGV
DGVWTYDDATKTFTVTEVNTPAVTTYKLVINGKTLKGETTTKAVDAETAEKAFKQYAND
NGVDGVWTYDDATKTFTVTEIGENLYFQGIDENLYFQGGSMDEKTTGWRGGHVVEGLAG
ELEQLRARLEHHPQGQREP"
CDS 3809..3829
/codon_start=1
/product="tobacco etch virus (TEV) protease recognition and
cleavage site"
/label=TEV site
/translation="ENLYFQG"
CDS 3836..3856
/codon_start=1
/product="tobacco etch virus (TEV) protease recognition and
cleavage site"
/label=TEV site
/translation="ENLYFQG"
CDS 3863..3976
/codon_start=1
/product="streptavidin-binding peptide"
/label=SBP
/note="selected from a peptide library; binds streptavidin
with nanomolar affinity (Keefe et al., 2001)"
/translation="MDEKTTGWRGGHVVEGLAGELEQLRARLEHHPQGQREP"
misc_feature 3979..4024
/note="polylinker; unique cloning sites for EcoRI,
EagI/NotI, XhoI, KpnI, XbaI"
intron 4102..4167
/label=small t intron
/note="SV40 (simian virus 40) small t antigen intron"
CDS 4297..4317
/codon_start=1
/product="nuclear localization signal of SV40 (simian virus
40) large T antigen"
/label=SV40 NLS
/translation="PKKKRKV"
polyA_signal 4742..4876
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
CDS join(5381..5452,5847..6120,6195..6849,6911..7226,7447..7578,
7649..8263)
/codon_start=1
/gene="white"
/product="Drosophila white gene eye color pigment"
/label=mini-white
/note="This is a modified version of the white gene lacking
part of the first intron."
/translation="MGQEDQELLIRGGSKHPSAEHLNNGDSGAASQSCINQGFGQAKNY
GTLLPPSPPEDSGSGSGQLAENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERH
IPAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNG
QPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQEL
SLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQ
VLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCP
TNYNPADFYVQVLAVVPGREIESRDRIAKICDNFAISKVARDMEQLLATKNLEKPLEQP
ENGYTYKATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVG
VMNINGAIFLFLTNMTFQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPL
FLTVPLVFTAIAYPMIGLRAGVLHFFNCLALVTLVANVSTSFGYLISCASSSTSMALSV
GPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVEPGEISCTSS
NTTCPSSGKVILETLNFSAADLPLDYVGLAILIVSFRVLAYLALRLRARRKE"
misc_feature 9041..9626
/label=P element 5 end
LOCUS Exported 9626 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pUAST-NTAP(GS), complete sequence.
ACCESSION EU663572
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9626)
AUTHORS Kyriakakis P, Tipping M, Abed L, Veraksa A.
TITLE Tandem affinity purification in Drosophila: The advantages of the
GS-TAP system
JOURNAL Fly (Austin) 2 (4) (2008) In press
PUBMED 18719405
REFERENCE 2 (bases 1 to 9626)
AUTHORS Veraksa A, Kyriakakis P, Tipping M, Abed L.
TITLE Direct Submission
JOURNAL Submitted (20-APR-2008) Biology Department, University of
Massachusetts Boston, 100 Morrissey Blvd., Boston, MA 02125, USA
REFERENCE 3 (bases 1 to 9626)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..9626
/organism="Cloning vector pUAST-NTAP(GS)"
/mol_type="other DNA"
/note="mammalian GS-TAP vectors were originally described
in the following publication: Burckstummer T. et al. (2006)
Nature Methods 3, 1013-1019; designed for protein fusions
with the GS-TAP tag and inducible expression in transgenic
Drosophila; orientation is reversed relative to the
compiled sequence of pUAST in FlyBase"
/db_xref="taxon:546946"
rep_origin complement(235..823)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(994..1854)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(1855..1959)
/gene="bla"
/label=AmpR promoter
misc_feature 2761..2993
/label=P element 3 end
/note="P element 3 end"
protein_bind 3055..3149
/label=5X UAS
/bound_moiety="GAL4"
/note="five tandem copies of the ""ScaI site"" 17-mer
CGGAGTACTGTCCTCCG, an upstream activating sequence (UAS)
that efficiently binds yeast Gal4 (Webster et al., 1988;
Pfeiffer et al., 2010)"
promoter 3168..3406
/label=hsp70 promoter
/note="Drosophila melanogaster hsp70Bb promoter"
CDS 3431..3976
/codon_start=1
/product="NTAP(GS) tag"
/label=NTAP
/protein_id="ACF35722.1"
/translation="MGTPAVTTYKLVINGKTLKGETTTKAVDAETAEKAFKQYANDNGV
DGVWTYDDATKTFTVTEVNTPAVTTYKLVINGKTLKGETTTKAVDAETAEKAFKQYAND
NGVDGVWTYDDATKTFTVTEIGENLYFQGIDENLYFQGGSMDEKTTGWRGGHVVEGLAG
ELEQLRARLEHHPQGQREP"
CDS 3809..3829
/codon_start=1
/product="tobacco etch virus (TEV) protease recognition and
cleavage site"
/label=TEV site
/translation="ENLYFQG"
CDS 3836..3856
/codon_start=1
/product="tobacco etch virus (TEV) protease recognition and
cleavage site"
/label=TEV site
/translation="ENLYFQG"
CDS 3863..3976
/codon_start=1
/product="streptavidin-binding peptide"
/label=SBP
/note="selected from a peptide library; binds streptavidin
with nanomolar affinity (Keefe et al., 2001)"
/translation="MDEKTTGWRGGHVVEGLAGELEQLRARLEHHPQGQREP"
misc_feature 3979..4024
/note="polylinker; unique cloning sites for EcoRI,
EagI/NotI, XhoI, KpnI, XbaI"
intron 4102..4167
/label=small t intron
/note="SV40 (simian virus 40) small t antigen intron"
CDS 4297..4317
/codon_start=1
/product="nuclear localization signal of SV40 (simian virus
40) large T antigen"
/label=SV40 NLS
/translation="PKKKRKV"
polyA_signal 4742..4876
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
CDS join(5381..5452,5847..6120,6195..6849,6911..7226,7447..7578,
7649..8263)
/codon_start=1
/gene="white"
/product="Drosophila white gene eye color pigment"
/label=mini-white
/note="This is a modified version of the white gene lacking
part of the first intron."
/translation="MGQEDQELLIRGGSKHPSAEHLNNGDSGAASQSCINQGFGQAKNY
GTLLPPSPPEDSGSGSGQLAENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERH
IPAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNG
QPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQEL
SLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQ
VLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCP
TNYNPADFYVQVLAVVPGREIESRDRIAKICDNFAISKVARDMEQLLATKNLEKPLEQP
ENGYTYKATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVG
VMNINGAIFLFLTNMTFQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPL
FLTVPLVFTAIAYPMIGLRAGVLHFFNCLALVTLVANVSTSFGYLISCASSSTSMALSV
GPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVEPGEISCTSS
NTTCPSSGKVILETLNFSAADLPLDYVGLAILIVSFRVLAYLALRLRARRKE"
misc_feature 9041..9626
/label=P element 5 end