Garcia-Fruitos E, Gonzalez-Montalban N, Morell M, Vera A, Ferraz RM, Aris A, Ventura S, Villaverde A.
pTVP1GFP 载体载体图谱
pTVP1GFP 载体载体序列
LOCUS Exported 5514 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pTVP1GFP, complete sequence.
ACCESSION KM242650
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5514)
AUTHORS Garcia-Fruitos E, Gonzalez-Montalban N, Morell M, Vera A, Ferraz RM,
Aris A, Ventura S, Villaverde A.
TITLE Aggregation as bacterial inclusion bodies does not imply
inactivation of enzymes and fluorescent proteins
JOURNAL Microb. Cell Fact. 4, 27 (2005)
PUBMED 16156893
REFERENCE 2 (bases 1 to 5514)
AUTHORS Garcia-Fruitos E.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2014) Institut de Biotecnologia i de Biomedicina,
CIBER-BBN, Autonomous University of Barcelona, Campus Bellaterra,
Bellaterra 08193, Spain
REFERENCE 3 (bases 1 to 5514)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5514
/organism="Cloning vector pTVP1GFP"
/mol_type="other DNA"
/db_xref="taxon:1559749"
promoter 193..222
/label=trc promoter
/note="strong E. coli promoter; hybrid between the trp and
lac UV5 promoters"
protein_bind 230..246
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
CDS 267..1622
/codon_start=1
/product="VP1/green fluorescent fusion protein"
/label=VP1/green fluorescent fusion protein
/note="VP1/GFP; derived from Foot-and-mouth disease virus
and Aequorea victoria"
/protein_id="AIT38555.1"
/translation="METTTTGESADPVTTTVENYGGETQVQRRHHTDVAFVLDRFVEVT
VSDNQHTLDVMQAHKDNIVGALLRAATYYFSDLEIAVTHTGKLTWVPNGAPVSALNNTT
NPTAYHKGPVTRLALPYTAPHRVLATAYTGTTTYTASARGDSAHLTTTHARHLPTSFNF
GAVKAETITELLVRMKRAELYCPRPILPIQPTGDRRKQQLVAPAKQLLGIPSKGEELFT
GVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLTYGV
QCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDGNYKTRAEVKFEGDTLVNRIELKG
IDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKANFKIRHNIEDGSVQLADHYQQNT
PIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITHGMDELYK"
CDS 909..1619
/codon_start=1
/product="GFP variant that folds robustly even when fused
to poorly folded proteins (Pedelacq et al., 2006)"
/label=superfolder GFP
/translation="SKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKF
ICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDGN
YKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKAN
FKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEF
VTAAGITHGMDELYK"
terminator 1867..1953
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 2045..2072
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
promoter 2092..2183
/gene="bla"
/label=AmpR promoter
CDS 2184..3044
/codon_start=1
/product="beta-lactamase"
/label=beta-lactamase
/protein_id="AIT38556.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPTAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 3215..3803
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 3989..4129
/label=bom
/note="basis of mobility region from pBR322"
promoter 4315..4392
/gene="lacI (mutant)"
/label=lacIq promoter
/note="In the lacIq allele, a single base change in the
promoter boosts expression of the lacI gene about 10-fold."
CDS 4393..5475
/codon_start=1
/product="lac repressor protein"
/label=lac repressor protein
/protein_id="AIT38557.1"
/translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL
NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV
EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
YIPPSTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
ALADSLMQLARQVSRLESGQ"
Garcia-Fruitos E, Gonzalez-Montalban N, Morell M, Vera A, Ferraz RM, Aris A, Ventura S, Villaverde A.
pTVP1GFP 载体载体图谱
pTVP1GFP 载体载体序列
LOCUS Exported 5514 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pTVP1GFP, complete sequence.
ACCESSION KM242650
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5514)
AUTHORS Garcia-Fruitos E, Gonzalez-Montalban N, Morell M, Vera A, Ferraz RM,
Aris A, Ventura S, Villaverde A.
TITLE Aggregation as bacterial inclusion bodies does not imply
inactivation of enzymes and fluorescent proteins
JOURNAL Microb. Cell Fact. 4, 27 (2005)
PUBMED 16156893
REFERENCE 2 (bases 1 to 5514)
AUTHORS Garcia-Fruitos E.
TITLE Direct Submission
JOURNAL Submitted (15-JUL-2014) Institut de Biotecnologia i de Biomedicina,
CIBER-BBN, Autonomous University of Barcelona, Campus Bellaterra,
Bellaterra 08193, Spain
REFERENCE 3 (bases 1 to 5514)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5514
/organism="Cloning vector pTVP1GFP"
/mol_type="other DNA"
/db_xref="taxon:1559749"
promoter 193..222
/label=trc promoter
/note="strong E. coli promoter; hybrid between the trp and
lac UV5 promoters"
protein_bind 230..246
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
CDS 267..1622
/codon_start=1
/product="VP1/green fluorescent fusion protein"
/label=VP1/green fluorescent fusion protein
/note="VP1/GFP; derived from Foot-and-mouth disease virus
and Aequorea victoria"
/protein_id="AIT38555.1"
/translation="METTTTGESADPVTTTVENYGGETQVQRRHHTDVAFVLDRFVEVT
VSDNQHTLDVMQAHKDNIVGALLRAATYYFSDLEIAVTHTGKLTWVPNGAPVSALNNTT
NPTAYHKGPVTRLALPYTAPHRVLATAYTGTTTYTASARGDSAHLTTTHARHLPTSFNF
GAVKAETITELLVRMKRAELYCPRPILPIQPTGDRRKQQLVAPAKQLLGIPSKGEELFT
GVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLTYGV
QCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDGNYKTRAEVKFEGDTLVNRIELKG
IDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKANFKIRHNIEDGSVQLADHYQQNT
PIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITHGMDELYK"
CDS 909..1619
/codon_start=1
/product="GFP variant that folds robustly even when fused
to poorly folded proteins (Pedelacq et al., 2006)"
/label=superfolder GFP
/translation="SKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKF
ICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDGN
YKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKAN
FKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEF
VTAAGITHGMDELYK"
terminator 1867..1953
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 2045..2072
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
promoter 2092..2183
/gene="bla"
/label=AmpR promoter
CDS 2184..3044
/codon_start=1
/product="beta-lactamase"
/label=beta-lactamase
/protein_id="AIT38556.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPTAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 3215..3803
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 3989..4129
/label=bom
/note="basis of mobility region from pBR322"
promoter 4315..4392
/gene="lacI (mutant)"
/label=lacIq promoter
/note="In the lacIq allele, a single base change in the
promoter boosts expression of the lacI gene about 10-fold."
CDS 4393..5475
/codon_start=1
/product="lac repressor protein"
/label=lac repressor protein
/protein_id="AIT38557.1"
/translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL
NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV
EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
YIPPSTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
ALADSLMQLARQVSRLESGQ"