| 载体基本信息 |
| 载体名称 |
pTRK1-PRslpA-crtBcas |
载体长度 |
8796 bp |
| 载体类型 |
Cloning vector |
载体来源 |
Fujita A, Misumi Y, Honda S, Sato T, Koyama Y. |
pTRK1-PRslpA-crtBcas 载体载体图谱
pTRK1-PRslpA-crtBcas 载体载体序列
LOCUS Exported 8796 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pTRK1-PRslpA-crtBcas, complete sequence.
ACCESSION KC875823
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 8796)
AUTHORS Fujita A, Misumi Y, Honda S, Sato T, Koyama Y.
TITLE Construction of new cloning vectors that employ the phytoene
synthase encoding gene for color screening of cloned DNA inserts in
Thermus thermophilus
JOURNAL Gene (2013) In press
PUBMED 23845779
REFERENCE 2 (bases 1 to 8796)
AUTHORS Fujita A.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2013) Health Research Institute, National
Institute of Advanced Science and Technology, 1-8-31 Midorigaoka,
Ikeda, Osaka 563-8577, Japan
REFERENCE 3 (bases 1 to 8796)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..8796
/organism="Cloning vector pTRK1-PRslpA-crtBcas"
/mol_type="other DNA"
/label=T. thermophilus-E. coli shuttle vector
/note="T. thermophilus-E. coli shuttle vector"
/db_xref="taxon:1385596"
regulatory 145..644
/regulatory_class="promoter"
/note="slpA promoter"
misc_feature 650..655
/label=cloning site EcoRI
/note="cloning site EcoRI"
misc_feature 654..659
/label=cloning site XbaI
/note="cloning site XbaI"
CDS 660..1529
/codon_start=1
/gene="crtB"
/product="phytoene synthase"
/label=crtB
/protein_id="AGT36881.1"
/translation="MKMPASMEPDWKALLRVLRAHSATFYLGSLLFPKEARKGAWAVYA
ACRLGDEAVDGEGGGPEALEAWWAGVERAYRGRPLAEWEKGLAWALERWDIPFEAFLHM
REGFLTDLGPVRLGTEAELLRYCYQVAGTVGRMMAPIAGGGKEAEARAVKLGQAMQLTN
ILRDVGEDLERDRVYLPLDLLRAHGVEVEDLRAGRVTPGYRALMAHLEGKARALYREGL
AGLGHLKVGRAAIALAALQYRGILDKLRLSGYDNLGRRAHLKAWERALLLPKAFLAARF
PPRPEGSP"
gene 660..1529
/gene="crtB"
/label=crtB
misc_feature 1265..1270
/label=cloning site Acc65I
/note="cloning site Acc65I"
misc_feature 1331..1336
/label=cloning site AvrII
/note="cloning site AvrII"
CDS complement(2511..3674)
/codon_start=1
/gene="repA"
/product="RepA"
/label=repA
/protein_id="AGT36882.1"
/translation="MVLRAYAALRGLSPEALRAHLLAPPLRPERAREAFQRPYLAHFAQ
TLPRYPYATDDPKEGVRIYKRENALKRVHVQVGHYPHAVLRLVVDVDLPWPQVEERIHA
LPPSLVLVNPRSGHFHAWYELDPIPLTPPPGREGSLKGALALLAEVEALLEAYYGADPG
YNGLLSRNPFLHPPEWTWGGGKRWSLRDLHRELRGLLPSGTRRRVDPGLASYGRNNALF
DRLRAEAYAHVALFRGVPGGEEAFRAWVEQRAHALNQSLFRDHPKGPLDPREVHHTAKS
VAKWTYRNYRGARVYPVSSTGRPDRSRLSPQARALIPPLQGQELQEAVREGGRRRGSRR
RQEAEEKLTEALKRLQARGERVTARALAREAGVKPHTASKWLKRMRE"
gene complement(2511..3674)
/gene="repA"
/label=repA
CDS 6166..6936
/codon_start=1
/gene="KNT"
/product="kanamycin nucleotidyltransferase"
/label=KNT
/protein_id="AGT36883.1"
/translation="MRIVNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGR
QTDGPYSDIEMMCVMSTEEAEFSHEWTTGEWKAEVNFYSEEILLDYASRVEPDWPLTHG
RFFSILPIYDPGGYFEKVYQTAKSVEAQKFHDAICALIVEELFEYAGKWRNIRVQGPTT
FLPSLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQPDLPPGYVQLCQLVMSGQLSD
PEKLLESLENFWNGIQEWTERHGYIVDVSKRIPF"
gene 6166..6936
/gene="KNT"
/label=KNT
CDS 6995..7855
/codon_start=1
/gene="Amp-R"
/product="beta-lactamase"
/label=Amp-R
/protein_id="AGT36884.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 6995..7855
/gene="Amp-R"
/label=Amp-R
rep_origin 8026..8614
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"