| 载体基本信息 |
| 载体名称 |
pTrcCDF-At4CL1m-AtCHI-PhCHS |
载体长度 |
7359 bp |
| 载体类型 |
Cloning vector |
载体来源 |
Kim B, Binkley R, Kim HU, Lee SY. |
pTrcCDF-At4CL1m-AtCHI-PhCHS 载体载体图谱
pTrcCDF-At4CL1m-AtCHI-PhCHS 载体载体序列
LOCUS Exported 7359 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pTrcCDF-At4CL1m-AtCHI-PhCHS, complete sequence.
ACCESSION MH488947
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7359)
AUTHORS Kim B, Binkley R, Kim HU, Lee SY.
TITLE Metabolic engineering of Escherichia coli for the enhanced
production of l-tyrosine
JOURNAL Biotechnol. Bioeng. (2018) In press
PUBMED 30019750
REFERENCE 2 (bases 1 to 7359)
AUTHORS Yang D, Kim WJ, Yoo SM, Choi JH, Ha SH, Lee MH, Lee SY.
TITLE Direct Submission
JOURNAL Submitted (15-JUN-2018) Dept. Chemical and Biomolecular Engineering,
Korea Advanced Institute of Science and Technology, Daehak-ro 291,
Daejeon 34141, South Korea
REFERENCE 3 (bases 1 to 7359)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7359
/organism="Cloning vector pTrcCDF-At4CL1m-AtCHI-PhCHS"
/lab_host="Escherichia coli"
/mol_type="other DNA"
/db_xref="taxon:2301185"
regulatory 175..204
/regulatory_class="promoter"
/note="Trc promoter"
promoter 175..204
/label=trc promoter
/note="strong E. coli promoter; hybrid between the trp and
lac UV5 promoters"
protein_bind 212..228
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
CDS 249..1934
/codon_start=1
/gene="4CL1m"
/product="4-coumarate:CoA ligase 1 (4AT mutant)"
/label=4CL1m
/note="I250L/N404K/I461V; derived from Arabidopsis
thaliana"
/protein_id="AXN70064.1"
/translation="MAPQEQAVSQVMEKQSNNNNSDVIFRSKLPDIYIPNHLSLHDYIF
QNISEFATKPCLINGPTGHVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFV
LSFLAASFRGATATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDDGVVIV
CIDDNESVPIPEGCLRFTELTQSTTEASEVIDSVEISPDDVVALPYSSGTTGLPKGVML
THKGLVTSVAQQVDGENPNLYFHSDDVLLCVLPMFHIYALNSIMLCGLRVGAAILIMPK
FEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLSSIRVVKSGAAPLGKELEDA
VNAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGD
SLSRKQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLK
ELVKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSELSEDDV
KQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLRAKLANGL"
gene 249..1934
/gene="4CL1m"
/label=4CL1m
CDS 1960..2700
/codon_start=1
/gene="CHI"
/product="chalcone isomerase"
/label=CHI
/note="derived from Arabidopsis thaliana"
/protein_id="AXN70065.1"
/translation="MSSSNACASPSPFPAVTKLHVDSVTFVPSVKSPASSNPLFLGGAG
VRGLDIQGKFVIFTVIGVYLEGNAVPSLSVKWKGKTTEELTESIPFFREIVTGAFEKFI
KVTMKLPLTGQQYSEKVTENCVAIWKQLGLYTDCEAKAVEKFLEIFKEETFPPGSSILF
ALSPTGSLTVAFSKDDSIPETGIAVIENKLLAEAVLESIIGKNGVSPGTRLSVAERLSQ
LMMKNKDEKEVSDHSVEEKLAKEN"
gene 1960..2700
/gene="CHI"
/label=CHI
CDS 2760..3929
/codon_start=1
/gene="CHS"
/product="chalcone synthase"
/label=CHS
/note="derived from Petunia x hybrida"
/protein_id="AXN70066.1"
/translation="MVTVEEYRKAQRAEGPATVMAIGTATPTNCVDQSTYPDYYFRITN
SEHKTDLKEKFKRMCEKSMIKKRYMHLTEEILKENPSMCEYMAPSLDARQDIVVVEVPK
LGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLTKLLGLRPSVKRLMMYQQG
CFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFGDGAGAI
IIGSDPIPGVERPLFELVSAAQTLLPDSHGAIDGHLREVGLTFHLLKDVPGLISKNIEK
SLEEAFRPLSISDWNSLFWIAHPGGPAILDQVEIKLGLKPEKLKATRNVLSNYGNMSSA
CVLFILDEMRKASAKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSVAT"
gene 2760..3929
/gene="CHS"
/label=CHS
regulatory 3957..4104
/regulatory_class="terminator"
/note="rrnBT1T2"
CDS complement(4275..5066)
/codon_start=1
/product="spectinomycin resistance protein"
/label=spectinomycin resistance protein
/protein_id="AXN70067.1"
/translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
VILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
promoter complement(5067..5158)
/gene="bla"
/label=AmpR promoter
rep_origin complement(5206..5944)
/direction=LEFT
/label=CDF
/note="CDF"
CDS complement(6154..7236)
/codon_start=1
/gene="lacIq"
/product="lac repressor protein"
/label=lacIq
/protein_id="AXN70068.1"
/translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL
NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV
EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
ALADSLMQLARQVSRLESGQ"
gene complement(6154..7236)
/gene="lacIq"
/label=lacIq
promoter complement(7237..7314)
/gene="lacI"
/label=lacI promoter