LOCUS Exported 4026 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Rabies virus-derived expression vector pTIT-P, complete sequence.
ACCESSION GU299213
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4026)
AUTHORS Finke S, Conzelmann KK.
TITLE Virus promoters determine interference by defective RNAs: selective
amplification of mini-RNA vectors and rescue from cDNA by a 3
copy-back ambisense rabies virus
JOURNAL J. Virol. 73 (5), 3818-3825 (1999)
PUBMED 10196276
REFERENCE 2 (bases 1 to 4026)
AUTHORS Wickersham IR, Sullivan HA, Seung HS.
TITLE Production of glycoprotein-deleted rabies viruses for monosynaptic
tracing and high-level gene expression in neurons
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4026)
AUTHORS Wickersham IR.
TITLE Direct Submission
JOURNAL Submitted (06-DEC-2009) Brain and Cognitive Sciences, Howard Hughes
Medical Institute and Massachusetts Institute of Technology, 43
Vassar St., Cambridge, MA 02139, USA
REFERENCE 4 (bases 1 to 4026)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4026
/organism="Rabies virus-derived expression vector pTIT-P"
/mol_type="other DNA"
/db_xref="taxon:715318"
primer_bind 148..164
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 171..190
/regulatory_class="promoter"
/note="T7"
promoter 171..189
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 204..703
/label=EMCV IRES
/note="EMCV IRES"
misc_feature 240..701
/label=IRES
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
CDS 706..1599
/codon_start=1
/gene="P"
/product="SAD B19 phosphoprotein"
/label=P
/protein_id="ADB43106.1"
/translation="MSKIFVNPSAIRAGLADLEMAEETVDLINRNIEDNQAHLQGEPIE
VDNLPEDMGRLHLDDGKSPNHGEIAKVGEGKYREDFQMDEGEDPSFLFQSYLENVGVQI
VRQMRSGERFLKIWSQTVEEIISYVAVNFPNPPGKSSEDKSTQTTGRELKKETTPTPSQ
RESQSSKARMAAQIASGPPALEWSATNEEDDLSVEAEIAHQIAESFSKKYKFPSRSSGI
LLYNFEQLKMNLDDIVKEAKNVPGVTRLAHDGSKLPLRCVLGWVALANSKKFQLLVESD
KLSKIMQDDLNRYTSC"
gene 706..1599
/gene="P"
/label=P
terminator 1712..1759
/label=T7 terminator
/note="transcription terminator for bacteriophage T7 RNA
polymerase"
primer_bind complement(1782..1798)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(1835..1853)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(1874..1890)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1898..1914
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1922..1952)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1967..1988
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2276..2864)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3035..3895)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampicillin-resistance protein"
/protein_id="ADB43107.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(3035..3895)
/gene="bla"
/label=bla
promoter complement(3896..4000)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 4026 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Rabies virus-derived expression vector pTIT-P, complete sequence.
ACCESSION GU299213
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4026)
AUTHORS Finke S, Conzelmann KK.
TITLE Virus promoters determine interference by defective RNAs: selective
amplification of mini-RNA vectors and rescue from cDNA by a 3
copy-back ambisense rabies virus
JOURNAL J. Virol. 73 (5), 3818-3825 (1999)
PUBMED 10196276
REFERENCE 2 (bases 1 to 4026)
AUTHORS Wickersham IR, Sullivan HA, Seung HS.
TITLE Production of glycoprotein-deleted rabies viruses for monosynaptic
tracing and high-level gene expression in neurons
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4026)
AUTHORS Wickersham IR.
TITLE Direct Submission
JOURNAL Submitted (06-DEC-2009) Brain and Cognitive Sciences, Howard Hughes
Medical Institute and Massachusetts Institute of Technology, 43
Vassar St., Cambridge, MA 02139, USA
REFERENCE 4 (bases 1 to 4026)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4026
/organism="Rabies virus-derived expression vector pTIT-P"
/mol_type="other DNA"
/db_xref="taxon:715318"
primer_bind 148..164
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 171..190
/regulatory_class="promoter"
/note="T7"
promoter 171..189
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 204..703
/label=EMCV IRES
/note="EMCV IRES"
misc_feature 240..701
/label=IRES
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
CDS 706..1599
/codon_start=1
/gene="P"
/product="SAD B19 phosphoprotein"
/label=P
/protein_id="ADB43106.1"
/translation="MSKIFVNPSAIRAGLADLEMAEETVDLINRNIEDNQAHLQGEPIE
VDNLPEDMGRLHLDDGKSPNHGEIAKVGEGKYREDFQMDEGEDPSFLFQSYLENVGVQI
VRQMRSGERFLKIWSQTVEEIISYVAVNFPNPPGKSSEDKSTQTTGRELKKETTPTPSQ
RESQSSKARMAAQIASGPPALEWSATNEEDDLSVEAEIAHQIAESFSKKYKFPSRSSGI
LLYNFEQLKMNLDDIVKEAKNVPGVTRLAHDGSKLPLRCVLGWVALANSKKFQLLVESD
KLSKIMQDDLNRYTSC"
gene 706..1599
/gene="P"
/label=P
terminator 1712..1759
/label=T7 terminator
/note="transcription terminator for bacteriophage T7 RNA
polymerase"
primer_bind complement(1782..1798)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(1835..1853)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(1874..1890)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1898..1914
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1922..1952)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1967..1988
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2276..2864)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3035..3895)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampicillin-resistance protein"
/protein_id="ADB43107.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(3035..3895)
/gene="bla"
/label=bla
promoter complement(3896..4000)
/gene="bla"
/label=AmpR promoter