LOCUS Exported 4932 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Rabies virus-derived expression vector pTIT-G, complete sequence.
ACCESSION GU299214
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4932)
AUTHORS Finke S, Mueller-Waldeck R, Conzelmann KK.
TITLE Rabies virus matrix protein regulates the balance of virus
transcription and replication
JOURNAL J. Gen. Virol. 84 (PT 6), 1613-1621 (2003)
PUBMED 12771432
REFERENCE 2 (bases 1 to 4932)
AUTHORS Wickersham IR, Sullivan HA, Seung HS.
TITLE Production of glycoprotein-deleted rabies viruses for monosynaptic
tracing and high-level gene expression in neurons
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4932)
AUTHORS Wickersham IR.
TITLE Direct Submission
JOURNAL Submitted (06-DEC-2009) Brain and Cognitive Sciences, Howard Hughes
Medical Institute and Massachusetts Institute of Technology, 43
Vassar St., Cambridge, MA 02139, USA
REFERENCE 4 (bases 1 to 4932)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4932
/organism="Rabies virus-derived expression vector pTIT-G"
/mol_type="other DNA"
/db_xref="taxon:715319"
primer_bind 148..164
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 171..190
/regulatory_class="promoter"
/note="T7"
promoter 171..189
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 204..703
/label=EMCV IRES
/note="EMCV IRES"
misc_feature 240..701
/label=IRES
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
CDS 706..2280
/codon_start=1
/gene="G"
/product="SAD B19 glycoprotein"
/label=G
/protein_id="ADB43108.1"
/translation="MVPQALLFVPLLVFPLCFGKFPIYTIPDKLGPWSPIDIHHLSCPN
NLVVEDEGCTNLSGFSYMELKVGYILAIKVNGFTCTGVVTEAETYTNFVGYVTTTFKRK
HFRPTPDACRAAYNWKMAGDPRYEESLHNPYPDYRWLRTVKTTKESLVIISPSVADLDP
YDRSLHSRVFPSGKCSGVAVSSTYCSTNHDYTIWMPENPRLGMSCDIFTNSRGKRASKG
SETCGFVDERGLYKSLKGACKLKLCGVLGLRLMDGTWVSMQTSNETKWCPPDKLVNLHD
FRSDEIEHLVVEELVRKREECLDALESIMTTKSVSFRRLSHLRKLVPGFGKAYTIFNKT
LMEADAHYKSVRTWNEILPSKGCLRVGGRCHPHVNGVFFNGIILGPDGNVLIPEMQSSL
LQQHMELLESSVIPLVHPLADPSTVFKDGDEAEDFVEVHLPDVHNQVSGVDLGLPNWGK
YVLLSAGALTALMLIIFLMTCCRRVNRSEPTQHNLRGTGREVSVTPQSGKIISSWESHK
SGGETRL"
gene 706..2280
/gene="G"
/label=G
terminator 2618..2665
/label=T7 terminator
/note="transcription terminator for bacteriophage T7 RNA
polymerase"
primer_bind complement(2688..2704)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2741..2759)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2780..2796)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2804..2820
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2828..2858)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2873..2894
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3182..3770)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3941..4801)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampicillin-resistance protein"
/protein_id="ADB43109.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(3941..4801)
/gene="bla"
/label=bla
promoter complement(4802..4906)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 4932 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Rabies virus-derived expression vector pTIT-G, complete sequence.
ACCESSION GU299214
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4932)
AUTHORS Finke S, Mueller-Waldeck R, Conzelmann KK.
TITLE Rabies virus matrix protein regulates the balance of virus
transcription and replication
JOURNAL J. Gen. Virol. 84 (PT 6), 1613-1621 (2003)
PUBMED 12771432
REFERENCE 2 (bases 1 to 4932)
AUTHORS Wickersham IR, Sullivan HA, Seung HS.
TITLE Production of glycoprotein-deleted rabies viruses for monosynaptic
tracing and high-level gene expression in neurons
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4932)
AUTHORS Wickersham IR.
TITLE Direct Submission
JOURNAL Submitted (06-DEC-2009) Brain and Cognitive Sciences, Howard Hughes
Medical Institute and Massachusetts Institute of Technology, 43
Vassar St., Cambridge, MA 02139, USA
REFERENCE 4 (bases 1 to 4932)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4932
/organism="Rabies virus-derived expression vector pTIT-G"
/mol_type="other DNA"
/db_xref="taxon:715319"
primer_bind 148..164
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 171..190
/regulatory_class="promoter"
/note="T7"
promoter 171..189
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 204..703
/label=EMCV IRES
/note="EMCV IRES"
misc_feature 240..701
/label=IRES
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
CDS 706..2280
/codon_start=1
/gene="G"
/product="SAD B19 glycoprotein"
/label=G
/protein_id="ADB43108.1"
/translation="MVPQALLFVPLLVFPLCFGKFPIYTIPDKLGPWSPIDIHHLSCPN
NLVVEDEGCTNLSGFSYMELKVGYILAIKVNGFTCTGVVTEAETYTNFVGYVTTTFKRK
HFRPTPDACRAAYNWKMAGDPRYEESLHNPYPDYRWLRTVKTTKESLVIISPSVADLDP
YDRSLHSRVFPSGKCSGVAVSSTYCSTNHDYTIWMPENPRLGMSCDIFTNSRGKRASKG
SETCGFVDERGLYKSLKGACKLKLCGVLGLRLMDGTWVSMQTSNETKWCPPDKLVNLHD
FRSDEIEHLVVEELVRKREECLDALESIMTTKSVSFRRLSHLRKLVPGFGKAYTIFNKT
LMEADAHYKSVRTWNEILPSKGCLRVGGRCHPHVNGVFFNGIILGPDGNVLIPEMQSSL
LQQHMELLESSVIPLVHPLADPSTVFKDGDEAEDFVEVHLPDVHNQVSGVDLGLPNWGK
YVLLSAGALTALMLIIFLMTCCRRVNRSEPTQHNLRGTGREVSVTPQSGKIISSWESHK
SGGETRL"
gene 706..2280
/gene="G"
/label=G
terminator 2618..2665
/label=T7 terminator
/note="transcription terminator for bacteriophage T7 RNA
polymerase"
primer_bind complement(2688..2704)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2741..2759)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2780..2796)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2804..2820
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2828..2858)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2873..2894
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3182..3770)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3941..4801)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampicillin-resistance protein"
/protein_id="ADB43109.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(3941..4801)
/gene="bla"
/label=bla
promoter complement(4802..4906)
/gene="bla"
/label=AmpR promoter