LOCUS Exported 3238 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pTHSSe_51, complete sequence.
ACCESSION MH029768
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3238)
AUTHORS Segall-Shapiro TH, Sontag ED, Voigt CA.
TITLE Engineered promoters enable constant gene expression at any copy
number in bacteria
JOURNAL Nat. Biotechnol. (2018) In press
PUBMED 29553576
REFERENCE 2 (bases 1 to 3238)
AUTHORS Segall-Shapiro TH, Sontag ED, Voigt CA.
TITLE Direct Submission
JOURNAL Submitted (06-MAR-2018) Synthetic Biology Center, Department of
Biological Engineering, Massachusetts Institute of Technology, 77
Massachusetts Avenue, Cambridge, MA 02139, USA
REFERENCE 3 (bases 1 to 3238)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3238
/organism="Cloning vector pTHSSe_51"
/mol_type="other DNA"
/label=p15A BbsI cloning vector
/note="p15A BbsI cloning vector"
/db_xref="taxon:2137932"
regulatory 13..60
/regulatory_class="promoter"
/note="PJ23105; derived from BBa_J23105"
ncRNA 61..135
/product="RiboJ"
/label=ribozyme
/note="insulator"
/ncRNA_class="ribozyme"
misc_RNA 63..112
/label=sTRSV HHRz
/note="hammerhead ribozyme from the tobacco ringspot virus
satellite RNA (Khvorova et al., 2003)"
regulatory 136..154
/regulatory_class="ribosome_binding_site"
/note="B0032; derived from BBa_B0032"
CDS 155..871
/codon_start=1
/product="sfGFP"
/label=sfGFP
/protein_id="AVR55150.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLK
FICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDG
TYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNFNSHNVYITADKQKNGIKA
NFKIRHNVEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSVLSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
CDS 155..868
/codon_start=1
/product="GFP variant that folds robustly even when fused
to poorly folded proteins (Pedelacq et al., 2006)"
/label=superfolder GFP
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLK
FICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDG
TYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNFNSHNVYITADKQKNGIKA
NFKIRHNVEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSVLSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
regulatory 880..1008
/regulatory_class="terminator"
/note="B0015; BBa_B0015"
terminator 888..959
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 975..1002
/label=T7Te terminator
/note="phage T7 early transcription terminator"
misc_feature 1021..1041
/label=BioBrick suffix
/note="universal suffix for all parts"
terminator 1042..1099
/label=his operon terminator
/note="This putative transcriptin terminator from the E.
coli his operon has a 2-bp deletion introduced during
synthesis. Its efficiency has not been determined."
rep_origin 1195..2020
/label=p15A origin
/note="p15A origin"
rep_origin 1212..1757
/direction=RIGHT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
CDS complement(2116..2976)
/codon_start=1
/product="TEM beta-lactamase"
/label=TEM beta-lactamase
/note="ampicillin resistance protein"
/protein_id="AVR55149.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(2977..3081)
/gene="bla"
/label=AmpR promoter
terminator 3171..3214
/label=bacterial terminator
/note="putative bacterial transcription terminator"
misc_feature 3217..3238
/label=BioBrick prefix
/note="BioBrick prefix for parts that do not start with
""ATG"""
LOCUS Exported 3238 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pTHSSe_51, complete sequence.
ACCESSION MH029768
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3238)
AUTHORS Segall-Shapiro TH, Sontag ED, Voigt CA.
TITLE Engineered promoters enable constant gene expression at any copy
number in bacteria
JOURNAL Nat. Biotechnol. (2018) In press
PUBMED 29553576
REFERENCE 2 (bases 1 to 3238)
AUTHORS Segall-Shapiro TH, Sontag ED, Voigt CA.
TITLE Direct Submission
JOURNAL Submitted (06-MAR-2018) Synthetic Biology Center, Department of
Biological Engineering, Massachusetts Institute of Technology, 77
Massachusetts Avenue, Cambridge, MA 02139, USA
REFERENCE 3 (bases 1 to 3238)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3238
/organism="Cloning vector pTHSSe_51"
/mol_type="other DNA"
/label=p15A BbsI cloning vector
/note="p15A BbsI cloning vector"
/db_xref="taxon:2137932"
regulatory 13..60
/regulatory_class="promoter"
/note="PJ23105; derived from BBa_J23105"
ncRNA 61..135
/product="RiboJ"
/label=ribozyme
/note="insulator"
/ncRNA_class="ribozyme"
misc_RNA 63..112
/label=sTRSV HHRz
/note="hammerhead ribozyme from the tobacco ringspot virus
satellite RNA (Khvorova et al., 2003)"
regulatory 136..154
/regulatory_class="ribosome_binding_site"
/note="B0032; derived from BBa_B0032"
CDS 155..871
/codon_start=1
/product="sfGFP"
/label=sfGFP
/protein_id="AVR55150.1"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLK
FICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDG
TYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNFNSHNVYITADKQKNGIKA
NFKIRHNVEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSVLSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
CDS 155..868
/codon_start=1
/product="GFP variant that folds robustly even when fused
to poorly folded proteins (Pedelacq et al., 2006)"
/label=superfolder GFP
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLK
FICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDG
TYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNFNSHNVYITADKQKNGIKA
NFKIRHNVEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSVLSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
regulatory 880..1008
/regulatory_class="terminator"
/note="B0015; BBa_B0015"
terminator 888..959
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 975..1002
/label=T7Te terminator
/note="phage T7 early transcription terminator"
misc_feature 1021..1041
/label=BioBrick suffix
/note="universal suffix for all parts"
terminator 1042..1099
/label=his operon terminator
/note="This putative transcriptin terminator from the E.
coli his operon has a 2-bp deletion introduced during
synthesis. Its efficiency has not been determined."
rep_origin 1195..2020
/label=p15A origin
/note="p15A origin"
rep_origin 1212..1757
/direction=RIGHT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
CDS complement(2116..2976)
/codon_start=1
/product="TEM beta-lactamase"
/label=TEM beta-lactamase
/note="ampicillin resistance protein"
/protein_id="AVR55149.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(2977..3081)
/gene="bla"
/label=AmpR promoter
terminator 3171..3214
/label=bacterial terminator
/note="putative bacterial transcription terminator"
misc_feature 3217..3238
/label=BioBrick prefix
/note="BioBrick prefix for parts that do not start with
""ATG"""