LOCUS Exported 4828 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pTac-His-Sgr_rppA, complete sequence.
ACCESSION MH488951
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4828)
AUTHORS Kim B, Binkley R, Kim HU, Lee SY.
TITLE Metabolic engineering of Escherichia coli for the enhanced
production of l-tyrosine
JOURNAL Biotechnol. Bioeng. (2018) In press
PUBMED 30019750
REFERENCE 2 (bases 1 to 4828)
AUTHORS Yang D, Kim WJ, Yoo SM, Choi JH, Ha SH, Lee MH, Lee SY.
TITLE Direct Submission
JOURNAL Submitted (15-JUN-2018) Dept. Chemical and Biomolecular Engineering,
Korea Advanced Institute of Science and Technology, Daehak-ro 291,
Daejeon 34141, South Korea
REFERENCE 3 (bases 1 to 4828)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4828
/organism="Cloning vector pTac-His-Sgr_rppA"
/lab_host="Escherichia coli"
/mol_type="other DNA"
/db_xref="taxon:2301157"
regulatory 175..203
/regulatory_class="promoter"
/note="Tac promoter"
promoter 175..203
/label=tac promoter
/note="strong E. coli promoter; hybrid between the trp and
lac UV5 promoters"
protein_bind 211..227
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
CDS 246..1382
/codon_start=1
/gene="rppA"
/product="1,3,6,8-tetrahydroxynaphthalene synthase"
/label=rppA
/note="N-terminal 6XHis-tagged; derived from Streptomyces
griseus"
/protein_id="AXN70078.1"
/translation="MHHHHHHATLCRPAIAVPEHVITMQQTLDLARETHAGHPQRDLVL
RLIQNTGVQTRHLVQPIEKTLAHPGFEVRNQVYEAEAKTRVPEVVRRALANAETEPSEI
DLIVYVSCTGFMMPSLTAWIINSMGFRPETRQLPIAQLGCAAGGAAINRAHDFCVAYPD
SNVLIVSCEFCSLCYQPTDIGVGSLLSNGLFGDALSAAVVRGQGGTGMRLERNGSHLVP
DTEDWISYAVRDTGFHFQLDKRVPGTMEMLAPVLLDLVDLHGWSVPNMDFFIVHAGGPR
ILDDLCHFLDLPPEMFRYSRATLTERGNIASSVVFDALARLFDDGGAAESAQGLIAGFG
PGITAEVAVGSWAKEGLGADVGRDLDELELTAGVALSG"
gene 246..1382
/gene="rppA"
/label=rppA
CDS 249..266
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
regulatory 1426..1573
/regulatory_class="terminator"
/note="rrnBT1T2"
CDS complement(1744..2535)
/codon_start=1
/product="spectinomycin resistance protein"
/label=spectinomycin resistance protein
/protein_id="AXN70079.1"
/translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
VILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
promoter complement(2536..2627)
/gene="bla"
/label=AmpR promoter
rep_origin complement(2675..3413)
/direction=LEFT
/label=CDF
/note="CDF"
CDS complement(3623..4705)
/codon_start=1
/gene="lacIq"
/product="lac repressor protein"
/label=lacIq
/protein_id="AXN70080.1"
/translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL
NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV
EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
ALADSLMQLARQVSRLESGQ"
gene complement(3623..4705)
/gene="lacIq"
/label=lacIq
promoter complement(4706..4783)
/gene="lacI"
/label=lacI promoter
LOCUS Exported 4828 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pTac-His-Sgr_rppA, complete sequence.
ACCESSION MH488951
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4828)
AUTHORS Kim B, Binkley R, Kim HU, Lee SY.
TITLE Metabolic engineering of Escherichia coli for the enhanced
production of l-tyrosine
JOURNAL Biotechnol. Bioeng. (2018) In press
PUBMED 30019750
REFERENCE 2 (bases 1 to 4828)
AUTHORS Yang D, Kim WJ, Yoo SM, Choi JH, Ha SH, Lee MH, Lee SY.
TITLE Direct Submission
JOURNAL Submitted (15-JUN-2018) Dept. Chemical and Biomolecular Engineering,
Korea Advanced Institute of Science and Technology, Daehak-ro 291,
Daejeon 34141, South Korea
REFERENCE 3 (bases 1 to 4828)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4828
/organism="Cloning vector pTac-His-Sgr_rppA"
/lab_host="Escherichia coli"
/mol_type="other DNA"
/db_xref="taxon:2301157"
regulatory 175..203
/regulatory_class="promoter"
/note="Tac promoter"
promoter 175..203
/label=tac promoter
/note="strong E. coli promoter; hybrid between the trp and
lac UV5 promoters"
protein_bind 211..227
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
CDS 246..1382
/codon_start=1
/gene="rppA"
/product="1,3,6,8-tetrahydroxynaphthalene synthase"
/label=rppA
/note="N-terminal 6XHis-tagged; derived from Streptomyces
griseus"
/protein_id="AXN70078.1"
/translation="MHHHHHHATLCRPAIAVPEHVITMQQTLDLARETHAGHPQRDLVL
RLIQNTGVQTRHLVQPIEKTLAHPGFEVRNQVYEAEAKTRVPEVVRRALANAETEPSEI
DLIVYVSCTGFMMPSLTAWIINSMGFRPETRQLPIAQLGCAAGGAAINRAHDFCVAYPD
SNVLIVSCEFCSLCYQPTDIGVGSLLSNGLFGDALSAAVVRGQGGTGMRLERNGSHLVP
DTEDWISYAVRDTGFHFQLDKRVPGTMEMLAPVLLDLVDLHGWSVPNMDFFIVHAGGPR
ILDDLCHFLDLPPEMFRYSRATLTERGNIASSVVFDALARLFDDGGAAESAQGLIAGFG
PGITAEVAVGSWAKEGLGADVGRDLDELELTAGVALSG"
gene 246..1382
/gene="rppA"
/label=rppA
CDS 249..266
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
regulatory 1426..1573
/regulatory_class="terminator"
/note="rrnBT1T2"
CDS complement(1744..2535)
/codon_start=1
/product="spectinomycin resistance protein"
/label=spectinomycin resistance protein
/protein_id="AXN70079.1"
/translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
VILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
promoter complement(2536..2627)
/gene="bla"
/label=AmpR promoter
rep_origin complement(2675..3413)
/direction=LEFT
/label=CDF
/note="CDF"
CDS complement(3623..4705)
/codon_start=1
/gene="lacIq"
/product="lac repressor protein"
/label=lacIq
/protein_id="AXN70080.1"
/translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL
NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV
EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
ALADSLMQLARQVSRLESGQ"
gene complement(3623..4705)
/gene="lacIq"
/label=lacIq
promoter complement(4706..4783)
/gene="lacI"
/label=lacI promoter