Li Y, Jiang Y, Chen H, Liao W, Li Z, Weiss R, Xie Z.
pT21_T21_72bp-TALER14 载体载体图谱
pT21_T21_72bp-TALER14 载体载体序列
LOCUS Exported 9872 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pT21_T21_72bp-TALER14, complete sequence.
ACCESSION KM486907
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9872)
AUTHORS Li Y, Jiang Y, Chen H, Liao W, Li Z, Weiss R, Xie Z.
TITLE Modular construction of mammalian gene circuits using TALE
transcriptional repressors
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 9872)
AUTHORS Li Y, Jiang Y, Chen H, Liao W.
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2014) Bioinformatics Division/Center for Synthetic
& Systems Biology, Tsinghua National Laboratory for Information
Science and Technology, Tsinghua University, Beijing 100084, China
REFERENCE 3 (bases 1 to 9872)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..9872
/organism="Cloning vector pT21_T21_72bp-TALER14"
/mol_type="other DNA"
/db_xref="taxon:1579921"
rep_origin complement(207..826)
/direction=LEFT
/label=pBR322 origin
/note="pBR322 origin"
rep_origin complement(222..810)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(981..1841)
/codon_start=1
/product="AmpR"
/label=AmpR
/protein_id="AIZ66095.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(1842..1946)
/gene="bla"
/label=AmpR promoter
rep_origin 1972..2427
/label=f1 origin
/note="f1 origin"
primer_bind 2569..2585
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 2595..2613
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 2628..3431
/label=HA-L
/note="left homology arm from the adeno-associated virus
integration site (AAVS1) within intron 1 of the human
PPP1R12C gene"
misc_feature 3510..3535
/label=SA
/note="splice acceptor site"
protein_bind 4207..4227
/gene="mutant version of attB"
/label=attB4
/bound_moiety="BP Clonase(TM)"
/note="core recombination site for the Gateway(R) BP
reaction"
protein_bind 4275..4369
/label=5X UAS
/bound_moiety="GAL4"
/note="five tandem copies of the ""ScaI site"" 17-mer
CGGAGTACTGTCCTCCG, an upstream activating sequence (UAS)
that efficiently binds yeast Gal4 (Webster et al., 1988;
Pfeiffer et al., 2010)"
misc_feature 4275..4291
/label=UAS
/note="UAS"
misc_feature 4294..4310
/label=UAS
/note="UAS"
misc_feature 4313..4329
/label=UAS
/note="UAS"
misc_feature 4332..4348
/label=UAS
/note="UAS"
misc_feature 4351..4367
/label=UAS
/note="UAS"
protein_bind 4383..4401
/label=TALER21 bs binding site
/bound_moiety="TALER21 bs"
misc_feature 4408..4467
/label=CMVmini
/note="CMVmini"
protein_bind 4474..4492
/label=TALER21 bs binding site
/bound_moiety="TALER21 bs"
protein_bind 4507..4531
/gene="mutant version of attB"
/label=attB1
/bound_moiety="BP Clonase(TM)"
/note="recombination site for the Gateway(R) BP reaction"
misc_feature 4584..7715
/label=similar to TALER14
/note="similar to TALER14"
CDS 7725..7745
/codon_start=1
/product="nuclear localization signal of SV40 (simian virus
40) large T antigen"
/label=SV40 NLS
/translation="PKKKRKV"
misc_feature 7794..7815
/label=FF4
/note="FF4"
misc_feature 7816..7837
/label=FF4
/note="FF4"
misc_feature 7838..7859
/label=FF4
/note="FF4"
misc_feature 7866..7887
/label=FF4
/note="FF4"
protein_bind complement(7905..7929)
/gene="mutant version of attB"
/label=attB2
/bound_moiety="BP Clonase(TM)"
/note="recombination site for the Gateway(R) BP reaction"
polyA_site 8084..8139
/label=-beta-globin poly(A) signal
/note="rabbit beta-globin polyadenylation signal"
primer_bind complement(8500..8516)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 8524..8540
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(8548..8578)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 8593..8614
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
misc_feature 8787..9623
/label=HA-R
/note="right homology arm from the adeno-associated virus
integration site (AAVS1) within intron 1 of the human
PPP1R12C gene"
promoter complement(9653..9671)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(9692..9708)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 9716..9732
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(9740..9770)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 9785..9806
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
Li Y, Jiang Y, Chen H, Liao W, Li Z, Weiss R, Xie Z.
pT21_T21_72bp-TALER14 载体载体图谱
pT21_T21_72bp-TALER14 载体载体序列
LOCUS Exported 9872 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pT21_T21_72bp-TALER14, complete sequence.
ACCESSION KM486907
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9872)
AUTHORS Li Y, Jiang Y, Chen H, Liao W, Li Z, Weiss R, Xie Z.
TITLE Modular construction of mammalian gene circuits using TALE
transcriptional repressors
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 9872)
AUTHORS Li Y, Jiang Y, Chen H, Liao W.
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2014) Bioinformatics Division/Center for Synthetic
& Systems Biology, Tsinghua National Laboratory for Information
Science and Technology, Tsinghua University, Beijing 100084, China
REFERENCE 3 (bases 1 to 9872)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..9872
/organism="Cloning vector pT21_T21_72bp-TALER14"
/mol_type="other DNA"
/db_xref="taxon:1579921"
rep_origin complement(207..826)
/direction=LEFT
/label=pBR322 origin
/note="pBR322 origin"
rep_origin complement(222..810)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(981..1841)
/codon_start=1
/product="AmpR"
/label=AmpR
/protein_id="AIZ66095.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(1842..1946)
/gene="bla"
/label=AmpR promoter
rep_origin 1972..2427
/label=f1 origin
/note="f1 origin"
primer_bind 2569..2585
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 2595..2613
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 2628..3431
/label=HA-L
/note="left homology arm from the adeno-associated virus
integration site (AAVS1) within intron 1 of the human
PPP1R12C gene"
misc_feature 3510..3535
/label=SA
/note="splice acceptor site"
protein_bind 4207..4227
/gene="mutant version of attB"
/label=attB4
/bound_moiety="BP Clonase(TM)"
/note="core recombination site for the Gateway(R) BP
reaction"
protein_bind 4275..4369
/label=5X UAS
/bound_moiety="GAL4"
/note="five tandem copies of the ""ScaI site"" 17-mer
CGGAGTACTGTCCTCCG, an upstream activating sequence (UAS)
that efficiently binds yeast Gal4 (Webster et al., 1988;
Pfeiffer et al., 2010)"
misc_feature 4275..4291
/label=UAS
/note="UAS"
misc_feature 4294..4310
/label=UAS
/note="UAS"
misc_feature 4313..4329
/label=UAS
/note="UAS"
misc_feature 4332..4348
/label=UAS
/note="UAS"
misc_feature 4351..4367
/label=UAS
/note="UAS"
protein_bind 4383..4401
/label=TALER21 bs binding site
/bound_moiety="TALER21 bs"
misc_feature 4408..4467
/label=CMVmini
/note="CMVmini"
protein_bind 4474..4492
/label=TALER21 bs binding site
/bound_moiety="TALER21 bs"
protein_bind 4507..4531
/gene="mutant version of attB"
/label=attB1
/bound_moiety="BP Clonase(TM)"
/note="recombination site for the Gateway(R) BP reaction"
misc_feature 4584..7715
/label=similar to TALER14
/note="similar to TALER14"
CDS 7725..7745
/codon_start=1
/product="nuclear localization signal of SV40 (simian virus
40) large T antigen"
/label=SV40 NLS
/translation="PKKKRKV"
misc_feature 7794..7815
/label=FF4
/note="FF4"
misc_feature 7816..7837
/label=FF4
/note="FF4"
misc_feature 7838..7859
/label=FF4
/note="FF4"
misc_feature 7866..7887
/label=FF4
/note="FF4"
protein_bind complement(7905..7929)
/gene="mutant version of attB"
/label=attB2
/bound_moiety="BP Clonase(TM)"
/note="recombination site for the Gateway(R) BP reaction"
polyA_site 8084..8139
/label=-beta-globin poly(A) signal
/note="rabbit beta-globin polyadenylation signal"
primer_bind complement(8500..8516)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 8524..8540
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(8548..8578)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 8593..8614
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
misc_feature 8787..9623
/label=HA-R
/note="right homology arm from the adeno-associated virus
integration site (AAVS1) within intron 1 of the human
PPP1R12C gene"
promoter complement(9653..9671)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(9692..9708)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 9716..9732
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(9740..9770)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 9785..9806
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."