LOCUS Exported 4850 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pSYFP2-sp, complete sequence.
ACCESSION MH050936
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4850)
AUTHORS Zhang JY, Lin GM, Xing WY, Zhang CC.
TITLE Diversity of Growth Patterns Probed in Live Cyanobacterial Cells
Using a Fluorescent Analog of a Peptidoglycan Precursor
JOURNAL Front Microbiol 9, 791 (2018)
PUBMED 29740419
REFERENCE 2 (bases 1 to 4850)
AUTHORS Zhang J-Y., Lin G-M., Xing W-Y., Zhang C-C.
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2018) Institute of Hydrobiology, Donghu Nanlu,
Wuhan, Hubei 430072, 086
REFERENCE 3 (bases 1 to 4850)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4850
/organism="Cloning vector pSYFP2-sp"
/mol_type="other DNA"
/db_xref="taxon:2201267"
promoter 96..200
/gene="bla"
/label=AmpR promoter
CDS 201..1061
/codon_start=1
/gene="amp"
/product="ampicillin resistance protein"
/label=amp
/protein_id="AWK77092.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 201..1061
/gene="amp"
/label=amp
rep_origin 1232..1820
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2108..2129
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2144..2174
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2182..2198
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2206..2222
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 2308..2334
/label=domain linker
/note="domain linker"
misc_feature 2335..3048
/label=super yellow fluorescent protein 2
/note="super yellow fluorescent protein 2"
misc_feature 3049..3078
/label=domain linker
/note="domain linker"
misc_feature 3079..3168
/label=TwinStrep affinity purification tag
/note="TwinStrep affinity purification tag"
CDS 3085..3108
/codon_start=1
/product="peptide that binds Strep-Tactin(R), an engineered
form of streptavidin"
/label=Strep-Tag II
/translation="WSHPQFEK"
CDS 3145..3168
/codon_start=1
/product="peptide that binds Strep-Tactin(R), an engineered
form of streptavidin"
/label=Strep-Tag II
/translation="WSHPQFEK"
terminator 3179..3226
/label=T7 terminator
/note="transcription terminator for bacteriophage T7 RNA
polymerase"
regulatory 3179..3225
/regulatory_class="terminator"
CDS 3467..4258
/codon_start=1
/gene="sp"
/product="spectinomycin and streptomycin resistance
protein"
/label=sp
/protein_id="AWK77093.1"
/translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
VILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
gene 3467..4258
/gene="sp"
/label=sp
regulatory 4316..4334
/regulatory_class="terminator"
primer_bind complement(4456..4472)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
LOCUS Exported 4850 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pSYFP2-sp, complete sequence.
ACCESSION MH050936
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4850)
AUTHORS Zhang JY, Lin GM, Xing WY, Zhang CC.
TITLE Diversity of Growth Patterns Probed in Live Cyanobacterial Cells
Using a Fluorescent Analog of a Peptidoglycan Precursor
JOURNAL Front Microbiol 9, 791 (2018)
PUBMED 29740419
REFERENCE 2 (bases 1 to 4850)
AUTHORS Zhang J-Y., Lin G-M., Xing W-Y., Zhang C-C.
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2018) Institute of Hydrobiology, Donghu Nanlu,
Wuhan, Hubei 430072, 086
REFERENCE 3 (bases 1 to 4850)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4850
/organism="Cloning vector pSYFP2-sp"
/mol_type="other DNA"
/db_xref="taxon:2201267"
promoter 96..200
/gene="bla"
/label=AmpR promoter
CDS 201..1061
/codon_start=1
/gene="amp"
/product="ampicillin resistance protein"
/label=amp
/protein_id="AWK77092.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 201..1061
/gene="amp"
/label=amp
rep_origin 1232..1820
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2108..2129
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2144..2174
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2182..2198
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2206..2222
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 2308..2334
/label=domain linker
/note="domain linker"
misc_feature 2335..3048
/label=super yellow fluorescent protein 2
/note="super yellow fluorescent protein 2"
misc_feature 3049..3078
/label=domain linker
/note="domain linker"
misc_feature 3079..3168
/label=TwinStrep affinity purification tag
/note="TwinStrep affinity purification tag"
CDS 3085..3108
/codon_start=1
/product="peptide that binds Strep-Tactin(R), an engineered
form of streptavidin"
/label=Strep-Tag II
/translation="WSHPQFEK"
CDS 3145..3168
/codon_start=1
/product="peptide that binds Strep-Tactin(R), an engineered
form of streptavidin"
/label=Strep-Tag II
/translation="WSHPQFEK"
terminator 3179..3226
/label=T7 terminator
/note="transcription terminator for bacteriophage T7 RNA
polymerase"
regulatory 3179..3225
/regulatory_class="terminator"
CDS 3467..4258
/codon_start=1
/gene="sp"
/product="spectinomycin and streptomycin resistance
protein"
/label=sp
/protein_id="AWK77093.1"
/translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
VILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
gene 3467..4258
/gene="sp"
/label=sp
regulatory 4316..4334
/regulatory_class="terminator"
primer_bind complement(4456..4472)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"