LOCUS Exported 3144 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pStartK, complete sequence.
ACCESSION EU530620
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3144)
AUTHORS Wu S, Ying G, Wu Q, Capecchi MR.
TITLE A protocol for constructing gene targeting vectors: generating
knockout mice for the cadherin family and beyond
JOURNAL Nat Protoc 3 (6), 1056-1076 (2008)
PUBMED 18546598
REFERENCE 2 (bases 1 to 3144)
AUTHORS Wu S, Capecchi MR.
TITLE Direct Submission
JOURNAL Submitted (29-FEB-2008) Howard Hughes Medical Institute, University
of Utah, 15N 2030E, Salt Lake City, UT 84112, USA
REFERENCE 3 (bases 1 to 3144)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3144
/organism="Cloning vector pStartK"
/mol_type="other DNA"
/db_xref="taxon:512279"
misc_recomb 2..101
/note="attL1; target DNA sequence for site-specific Gateway
recombinases"
protein_bind 2..101
/gene="mutant version of attL"
/label=attL1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
CDS 256..561
/codon_start=1
/gene="ccdB"
/product="F-plasmid toxin"
/label=ccdB
/protein_id="ACC91751.1"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRIVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
gene 256..561
/gene="ccdB"
/label=ccdB
misc_recomb 590..689
/note="attL2; target DNA sequence for site-specific Gateway
recombinases"
protein_bind complement(590..689)
/gene="mutant version of attL"
/label=attL2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
rep_origin 722..1632
/label=p15A origin of replication
/note="p15A origin of replication"
rep_origin 822..1367
/direction=RIGHT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
CDS 1962..2777
/codon_start=1
/gene="kan"
/product="kanamycin resistance protein"
/label=kan
/protein_id="ACC91752.1"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
gene 1962..2777
/gene="kan"
/label=kan
terminator 2891..2977
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 3069..3096
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
LOCUS Exported 3144 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pStartK, complete sequence.
ACCESSION EU530620
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3144)
AUTHORS Wu S, Ying G, Wu Q, Capecchi MR.
TITLE A protocol for constructing gene targeting vectors: generating
knockout mice for the cadherin family and beyond
JOURNAL Nat Protoc 3 (6), 1056-1076 (2008)
PUBMED 18546598
REFERENCE 2 (bases 1 to 3144)
AUTHORS Wu S, Capecchi MR.
TITLE Direct Submission
JOURNAL Submitted (29-FEB-2008) Howard Hughes Medical Institute, University
of Utah, 15N 2030E, Salt Lake City, UT 84112, USA
REFERENCE 3 (bases 1 to 3144)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3144
/organism="Cloning vector pStartK"
/mol_type="other DNA"
/db_xref="taxon:512279"
misc_recomb 2..101
/note="attL1; target DNA sequence for site-specific Gateway
recombinases"
protein_bind 2..101
/gene="mutant version of attL"
/label=attL1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
CDS 256..561
/codon_start=1
/gene="ccdB"
/product="F-plasmid toxin"
/label=ccdB
/protein_id="ACC91751.1"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRIVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
gene 256..561
/gene="ccdB"
/label=ccdB
misc_recomb 590..689
/note="attL2; target DNA sequence for site-specific Gateway
recombinases"
protein_bind complement(590..689)
/gene="mutant version of attL"
/label=attL2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
rep_origin 722..1632
/label=p15A origin of replication
/note="p15A origin of replication"
rep_origin 822..1367
/direction=RIGHT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
CDS 1962..2777
/codon_start=1
/gene="kan"
/product="kanamycin resistance protein"
/label=kan
/protein_id="ACC91752.1"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
gene 1962..2777
/gene="kan"
/label=kan
terminator 2891..2977
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 3069..3096
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"