LOCUS Exported 4790 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transformation vector pSK(+)PIBT 14, complete sequence.
ACCESSION EU184012
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4790)
AUTHORS Oertel W, Weissgerber A.
TITLE Transformation of Ulva mutabilis Foyn with plasmids integrating into
the chromosome
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4790)
AUTHORS Oertel W, Weissgerber A.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2007) Biochemistry, Genetics and Microbiology,
Division of Genetics, University of Regensburg, Universitaetsstr.
31, Regensburg, Bavaria 93053, Germany
REFERENCE 3 (bases 1 to 4790)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4790
/organism="Transformation vector pSK(+)PIBT 14"
/lab_host="Ulva mutabilis"
/mol_type="other DNA"
/db_xref="taxon:485101"
regulatory 1..546
/regulatory_class="promoter"
/note="Ulva mutabilis RbcS promoter"
CDS join(547..554,1052..1418)
/codon_start=1
/gene="ble"
/product="bleomycin resistance protein"
/label=ble
/note="derived from Streptoalloteichus hindustanus; adapted
to Chlamydomonas reinhardtii and Ulva mutabilis codon
usage"
/protein_id="ABX56855.1"
/translation="MAKITSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDD
VTLFISAVQDQVVPDNTLAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGR
EFALRDPAGNCVHFVAEEQD"
gene 547..1418
/gene="ble"
/label=ble
intron 555..1051
/gene="ble"
/note="Ulva mutabilis RbcS intron 1; enhancer"
regulatory 1419..1807
/regulatory_class="terminator"
/note="Ulva mutabilis RbcS terminator"
misc_feature 1808..4511
/note="cloning vector pBlueScribe SK(+) with minor
modifications"
promoter complement(1832..1850)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(1857..1873)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 2018..2473
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 2502..2606
/gene="bla"
/label=AmpR promoter
CDS 2607..3467
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 3638..4226
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 4514..4535
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 4550..4580
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4588..4604
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 4612..4628
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 4649..4667
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind 4704..4720
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(4754..4770)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
LOCUS Exported 4790 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Transformation vector pSK(+)PIBT 14, complete sequence.
ACCESSION EU184012
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4790)
AUTHORS Oertel W, Weissgerber A.
TITLE Transformation of Ulva mutabilis Foyn with plasmids integrating into
the chromosome
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4790)
AUTHORS Oertel W, Weissgerber A.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2007) Biochemistry, Genetics and Microbiology,
Division of Genetics, University of Regensburg, Universitaetsstr.
31, Regensburg, Bavaria 93053, Germany
REFERENCE 3 (bases 1 to 4790)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4790
/organism="Transformation vector pSK(+)PIBT 14"
/lab_host="Ulva mutabilis"
/mol_type="other DNA"
/db_xref="taxon:485101"
regulatory 1..546
/regulatory_class="promoter"
/note="Ulva mutabilis RbcS promoter"
CDS join(547..554,1052..1418)
/codon_start=1
/gene="ble"
/product="bleomycin resistance protein"
/label=ble
/note="derived from Streptoalloteichus hindustanus; adapted
to Chlamydomonas reinhardtii and Ulva mutabilis codon
usage"
/protein_id="ABX56855.1"
/translation="MAKITSAVPVLTARDVAGAVEFWTDRLGFSRDFVEDDFAGVVRDD
VTLFISAVQDQVVPDNTLAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIGEQPWGR
EFALRDPAGNCVHFVAEEQD"
gene 547..1418
/gene="ble"
/label=ble
intron 555..1051
/gene="ble"
/note="Ulva mutabilis RbcS intron 1; enhancer"
regulatory 1419..1807
/regulatory_class="terminator"
/note="Ulva mutabilis RbcS terminator"
misc_feature 1808..4511
/note="cloning vector pBlueScribe SK(+) with minor
modifications"
promoter complement(1832..1850)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(1857..1873)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 2018..2473
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 2502..2606
/gene="bla"
/label=AmpR promoter
CDS 2607..3467
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 3638..4226
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 4514..4535
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 4550..4580
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4588..4604
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 4612..4628
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 4649..4667
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind 4704..4720
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(4754..4770)
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"