LOCUS Exported 4879 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pSFBAD09, complete sequence.
ACCESSION DQ016036
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4879)
AUTHORS Zuger S, Iwai H.
TITLE Intein-based biosynthetic incorporation of unlabeled protein tags
into isotopically labeled proteins for NMR studies
JOURNAL Nat. Biotechnol. 23 (6), 736-740 (2005)
PUBMED 15908942
REFERENCE 2 (bases 1 to 4879)
AUTHORS Zueger S, Iwai H.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) Chemistry, University of Saskatchewan, 110
Science Place, Saskatoon, SK S7N 5C9, Canada
REFERENCE 3 (bases 1 to 4879)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4879
/organism="Expression vector pSFBAD09"
/mol_type="other DNA"
/label=in vivo protein splicing
/note="in vivo protein splicing"
/db_xref="taxon:328607"
CDS complement(186..1064)
/codon_start=1
/gene="araC"
/product="L-arabinose regulatory protein"
/label=araC
/translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGY
ILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYW
HEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRR
MEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGIS
VLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE
EKVNDVAVKLS"
promoter 1091..1375
/gene="araBAD"
/label=araBAD promoter
/note="promoter of the L-arabinose operon of E. coli; the
araC regulatory gene is transcribed in the opposite
direction (Guzman et al., 1995)"
RBS 1402..1424
/note="efficient ribosome binding site from bacteriophage
T7 gene 10 (Olins and Rangwala, 1989)"
CDS 1432..1713
/codon_start=1
/product="SspDnaE-C/CBD fusion protein"
/label=SspDnaE-C/CBD fusion protein
/note="DnaE intein and chitin-binding domain; C-terminal
domain of split DnaE intein derived from Synechocystis sp.
PCC6803"
/protein_id="AAY41169.1"
/translation="MVKVIGRRSLGVQRIFDIGLPQDHNFLLANGAIAANCFNKGTTNP
GVSAWQVNTAYTAGQLVTYNGKTYKCLQPHTSLAGWEPSNVPALWQLQ"
CDS 1555..1710
/codon_start=1
/gene="Bacillus circulans chiA"
/product="chitin binding domain from chitinase A1 (Watanabe
et al., 1994)"
/label=CBD
/translation="TTNPGVSAWQVNTAYTAGQLVTYNGKTYKCLQPHTSLAGWEPSNV
PALWQLQ"
terminator 1919..2005
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 2097..2124
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
promoter 2142..2233
/gene="bla"
/label=AmpR promoter
CDS 2234..3094
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 3136..3591
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
rep_origin 3702..4290
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 4476..4616
/label=bom
/note="basis of mobility region from pBR322"
LOCUS Exported 4879 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector pSFBAD09, complete sequence.
ACCESSION DQ016036
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4879)
AUTHORS Zuger S, Iwai H.
TITLE Intein-based biosynthetic incorporation of unlabeled protein tags
into isotopically labeled proteins for NMR studies
JOURNAL Nat. Biotechnol. 23 (6), 736-740 (2005)
PUBMED 15908942
REFERENCE 2 (bases 1 to 4879)
AUTHORS Zueger S, Iwai H.
TITLE Direct Submission
JOURNAL Submitted (22-APR-2005) Chemistry, University of Saskatchewan, 110
Science Place, Saskatoon, SK S7N 5C9, Canada
REFERENCE 3 (bases 1 to 4879)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4879
/organism="Expression vector pSFBAD09"
/mol_type="other DNA"
/label=in vivo protein splicing
/note="in vivo protein splicing"
/db_xref="taxon:328607"
CDS complement(186..1064)
/codon_start=1
/gene="araC"
/product="L-arabinose regulatory protein"
/label=araC
/translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGY
ILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYW
HEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRR
MEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGIS
VLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE
EKVNDVAVKLS"
promoter 1091..1375
/gene="araBAD"
/label=araBAD promoter
/note="promoter of the L-arabinose operon of E. coli; the
araC regulatory gene is transcribed in the opposite
direction (Guzman et al., 1995)"
RBS 1402..1424
/note="efficient ribosome binding site from bacteriophage
T7 gene 10 (Olins and Rangwala, 1989)"
CDS 1432..1713
/codon_start=1
/product="SspDnaE-C/CBD fusion protein"
/label=SspDnaE-C/CBD fusion protein
/note="DnaE intein and chitin-binding domain; C-terminal
domain of split DnaE intein derived from Synechocystis sp.
PCC6803"
/protein_id="AAY41169.1"
/translation="MVKVIGRRSLGVQRIFDIGLPQDHNFLLANGAIAANCFNKGTTNP
GVSAWQVNTAYTAGQLVTYNGKTYKCLQPHTSLAGWEPSNVPALWQLQ"
CDS 1555..1710
/codon_start=1
/gene="Bacillus circulans chiA"
/product="chitin binding domain from chitinase A1 (Watanabe
et al., 1994)"
/label=CBD
/translation="TTNPGVSAWQVNTAYTAGQLVTYNGKTYKCLQPHTSLAGWEPSNV
PALWQLQ"
terminator 1919..2005
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 2097..2124
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
promoter 2142..2233
/gene="bla"
/label=AmpR promoter
CDS 2234..3094
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 3136..3591
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
rep_origin 3702..4290
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 4476..4616
/label=bom
/note="basis of mobility region from pBR322"