Silva-Rocha R, Martinez-Garcia E, Calles B, Chavarria M, Arce-Rodriguez A, de Las Heras A, Paez-Espino AD, Durante-Rodriguez G, Kim J, Nikel PI, Platero R, de Lorenzo V.
pSEVA434 载体载体图谱
pSEVA434 载体载体序列
LOCUS Exported 4609 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pSEVA434, complete sequence.
ACCESSION KC847294
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4609)
AUTHORS Silva-Rocha R, Martinez-Garcia E, Calles B, Chavarria M,
Arce-Rodriguez A, de Las Heras A, Paez-Espino AD, Durante-Rodriguez
G, Kim J, Nikel PI, Platero R, de Lorenzo V.
TITLE The Standard European Vector Architecture (SEVA): a coherent
platform for the analysis and deployment of complex prokaryotic
phenotypes
JOURNAL Nucleic Acids Res. 41 (DATABASE ISSUE), D666-D675 (2013)
PUBMED 23180763
REFERENCE 2 (bases 1 to 4609)
AUTHORS Silva-Rocha R, Martinez-Garcia E, de Lorenzo V.
TITLE Direct Submission
JOURNAL Submitted (01-APR-2013) Systems Biology Program, CNB-CSIC, Darwin 3,
Madrid, Madrid 28029, Spain
REFERENCE 3 (bases 1 to 4609)
AUTHORS Silva-Rocha R, Martinez-Garcia E, de Lorenzo V.
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2014) Systems Biology Program, CNB-CSIC, Darwin 3,
Madrid, Madrid 28029, Spain
REFERENCE 4 (bases 1 to 4609)
AUTHORS .
TITLE Direct Submission
COMMENT On Sep 30, 2014 this sequence version replaced KC847294.1.
##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4609
/organism="Cloning vector pSEVA434"
/mol_type="other DNA"
/db_xref="taxon:1366861"
promoter 11..88
/gene="lacI (mutant)"
/label=lacIq promoter
/note="In the lacIq allele, a single base change in the
promoter boosts expression of the lacI gene about 10-fold."
CDS 89..1171
/codon_start=1
/gene="lacIq"
/product="LacIq"
/label=lacIq
/protein_id="AGR55413.1"
/translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL
NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV
EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
ALADSLMQLARQVSRLESGQ"
gene 89..1171
/gene="lacIq"
/label=lacIq
regulatory 1403..1432
/regulatory_class="promoter"
/note="Ptrc"
promoter 1403..1432
/label=trc promoter
/note="strong E. coli promoter; hybrid between the trp and
lac UV5 promoters"
protein_bind 1438..1458
/label=LacO binding site
/bound_moiety="LacO"
protein_bind 1440..1456
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
misc_feature 1483..1539
/label=MCS
/note="pUC18/19 multiple cloning site"
primer_bind complement(1548..1571)
/label=R24
/note="R24"
regulatory 1578..1680
/regulatory_class="terminator"
/note="T0"
terminator 1582..1676
/label=lambda t0 terminator
/note="transcription terminator from phage lambda"
CDS 1798..2703
/codon_start=1
/gene="aadA"
/product="spectinomycin adenyltransferase"
/label=aadA
/protein_id="AGR55414.1"
/translation="MPRASKQQARYAVGRCLMLWSSNDVTQQGSRPKTKLNIMREAVIA
EVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVRLDETTRRAL
INDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRNDILAGIFEPA
TIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNSPPDWAGDER
NVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQEEDRLASRA
DQLEEFVHYVKGEITKVVGK"
gene 1798..2703
/gene="aadA"
/label=aadA
CDS 1912..2703
/codon_start=1
/gene="aadA"
/product="aminoglycoside adenylyltransferase (Murphy,
1985)"
/label=SmR
/note="confers resistance to spectinomycin and
streptomycin"
/translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
VILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
misc_feature 2714..2959
/label=oriT
/note="oriT"
oriT 2849..2957
/note="incP origin of transfer"
CDS complement(2968..3630)
/codon_start=1
/gene="rep"
/product="replication protein"
/label=rep
/protein_id="AGR55415.1"
/translation="MATQSREIGIQAKNKPGHWVQTERKAHEAWAGLIARKPTAAMLLH
HLVAQMGHQNAVVVSQKTLSKLIGRSLRTVQYAVKDLVAERWISVVKLNGPGTVSAYVV
NDRVAWGQPRDQLRLSVFSAAVVVDHDDQDESLLGHGDLRRIPTLYPGEQQLPTGPGEE
PPSQPGIPGMEPDLPALTETEEWERRGQQRLPMPDEPCFLDDGEPLEPPTRVTLPRR"
gene complement(2968..3630)
/gene="rep"
/label=rep
rep_origin 3631..4402
/label=pBBR1 oriV
/note="replication origin of the broad-host-range plasmid
pBBR1 from Bordetella bronchiseptica; requires the pBBR1
Rep protein for replication"
regulatory 4504..4608
/regulatory_class="terminator"
/note="T1"
terminator 4517..4603
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
Silva-Rocha R, Martinez-Garcia E, Calles B, Chavarria M, Arce-Rodriguez A, de Las Heras A, Paez-Espino AD, Durante-Rodriguez G, Kim J, Nikel PI, Platero R, de Lorenzo V.
pSEVA434 载体载体图谱
pSEVA434 载体载体序列
LOCUS Exported 4609 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pSEVA434, complete sequence.
ACCESSION KC847294
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4609)
AUTHORS Silva-Rocha R, Martinez-Garcia E, Calles B, Chavarria M,
Arce-Rodriguez A, de Las Heras A, Paez-Espino AD, Durante-Rodriguez
G, Kim J, Nikel PI, Platero R, de Lorenzo V.
TITLE The Standard European Vector Architecture (SEVA): a coherent
platform for the analysis and deployment of complex prokaryotic
phenotypes
JOURNAL Nucleic Acids Res. 41 (DATABASE ISSUE), D666-D675 (2013)
PUBMED 23180763
REFERENCE 2 (bases 1 to 4609)
AUTHORS Silva-Rocha R, Martinez-Garcia E, de Lorenzo V.
TITLE Direct Submission
JOURNAL Submitted (01-APR-2013) Systems Biology Program, CNB-CSIC, Darwin 3,
Madrid, Madrid 28029, Spain
REFERENCE 3 (bases 1 to 4609)
AUTHORS Silva-Rocha R, Martinez-Garcia E, de Lorenzo V.
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2014) Systems Biology Program, CNB-CSIC, Darwin 3,
Madrid, Madrid 28029, Spain
REFERENCE 4 (bases 1 to 4609)
AUTHORS .
TITLE Direct Submission
COMMENT On Sep 30, 2014 this sequence version replaced KC847294.1.
##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4609
/organism="Cloning vector pSEVA434"
/mol_type="other DNA"
/db_xref="taxon:1366861"
promoter 11..88
/gene="lacI (mutant)"
/label=lacIq promoter
/note="In the lacIq allele, a single base change in the
promoter boosts expression of the lacI gene about 10-fold."
CDS 89..1171
/codon_start=1
/gene="lacIq"
/product="LacIq"
/label=lacIq
/protein_id="AGR55413.1"
/translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL
NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV
EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
ALADSLMQLARQVSRLESGQ"
gene 89..1171
/gene="lacIq"
/label=lacIq
regulatory 1403..1432
/regulatory_class="promoter"
/note="Ptrc"
promoter 1403..1432
/label=trc promoter
/note="strong E. coli promoter; hybrid between the trp and
lac UV5 promoters"
protein_bind 1438..1458
/label=LacO binding site
/bound_moiety="LacO"
protein_bind 1440..1456
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
misc_feature 1483..1539
/label=MCS
/note="pUC18/19 multiple cloning site"
primer_bind complement(1548..1571)
/label=R24
/note="R24"
regulatory 1578..1680
/regulatory_class="terminator"
/note="T0"
terminator 1582..1676
/label=lambda t0 terminator
/note="transcription terminator from phage lambda"
CDS 1798..2703
/codon_start=1
/gene="aadA"
/product="spectinomycin adenyltransferase"
/label=aadA
/protein_id="AGR55414.1"
/translation="MPRASKQQARYAVGRCLMLWSSNDVTQQGSRPKTKLNIMREAVIA
EVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVRLDETTRRAL
INDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRNDILAGIFEPA
TIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNSPPDWAGDER
NVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQEEDRLASRA
DQLEEFVHYVKGEITKVVGK"
gene 1798..2703
/gene="aadA"
/label=aadA
CDS 1912..2703
/codon_start=1
/gene="aadA"
/product="aminoglycoside adenylyltransferase (Murphy,
1985)"
/label=SmR
/note="confers resistance to spectinomycin and
streptomycin"
/translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
VILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
misc_feature 2714..2959
/label=oriT
/note="oriT"
oriT 2849..2957
/note="incP origin of transfer"
CDS complement(2968..3630)
/codon_start=1
/gene="rep"
/product="replication protein"
/label=rep
/protein_id="AGR55415.1"
/translation="MATQSREIGIQAKNKPGHWVQTERKAHEAWAGLIARKPTAAMLLH
HLVAQMGHQNAVVVSQKTLSKLIGRSLRTVQYAVKDLVAERWISVVKLNGPGTVSAYVV
NDRVAWGQPRDQLRLSVFSAAVVVDHDDQDESLLGHGDLRRIPTLYPGEQQLPTGPGEE
PPSQPGIPGMEPDLPALTETEEWERRGQQRLPMPDEPCFLDDGEPLEPPTRVTLPRR"
gene complement(2968..3630)
/gene="rep"
/label=rep
rep_origin 3631..4402
/label=pBBR1 oriV
/note="replication origin of the broad-host-range plasmid
pBBR1 from Bordetella bronchiseptica; requires the pBBR1
Rep protein for replication"
regulatory 4504..4608
/regulatory_class="terminator"
/note="T1"
terminator 4517..4603
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"