| 载体基本信息 |
| 载体名称 |
pSDU1 deltamobdeltaorfEF |
载体抗性 |
Chloramphenicol |
| 载体长度 |
4439 bp |
载体类型 |
Cloning vector |
| 载体来源 |
Wang R, Lin C, Lin J, Pang X, Liu X, Zhang C, Lin J, Chen L. |
pSDU1 deltamobdeltaorfEF 载体载体图谱
pSDU1 deltamobdeltaorfEF 载体载体序列
LOCUS Exported 4439 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pSDU1 deltamobdeltaorfEF, complete sequence.
ACCESSION MF163399
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4439)
AUTHORS Wang R, Lin C, Lin J, Pang X, Liu X, Zhang C, Lin J, Chen L.
TITLE Construction of novel pJRD215-derived plasmids using chloramphenicol
acetyltransferase (cat) gene as a selection marker for
Acidithiobacillus caldus
JOURNAL PLoS ONE 12 (8), e0183307 (2017)
PUBMED 28813510
REFERENCE 2 (bases 1 to 4439)
AUTHORS Wang R, Chen L, Lin J, Lin J.
TITLE Direct Submission
JOURNAL Submitted (26-MAY-2017) State Key Laboratory of Microbial
Technology, School of Life Sciences, Shandong University, 27 Shanda
South Road, Jinan, Shandong 250100, China
REFERENCE 3 (bases 1 to 4439)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Assembly Method :: BioEdit v. 7.1.3.0
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4439
/organism="Cloning vector pSDU1 deltamobdeltaorfEF"
/mol_type="other DNA"
/db_xref="taxon:2171590"
rep_origin 131..525
/label=RSF1010 oriV
/note="replication origin of the broad-host-range plasmid
RSF1010; requires the RSF1010 RepA/B/C proteins for
replication (Scholz et al., 1989)"
CDS 658..1629
/codon_start=1
/gene="repB"
/product="RepB"
/label=repB
/protein_id="AWD72713.1"
/translation="MKNDRTLQAIGRQLKAMGCERFDIGVRDATTGQMMNREWSAAEVL
QNTPWLKRMNAQGNDVYIRPAEQERHGLVLVDDLSEFDLDDMKAEGREPALVVETSPKN
YQAWVKVADAAGGELRGQIARTLASEYDADPASADSRHYGRLAGFTNRKDKHTTRAGYQ
PWVLLRESKGKTATAGPALVQQAGQQIEQAQRQQEKARRLASLELPERQLSRHRRTALD
EYRSEMAGLVKRFGDDLSKCDFIAAQKLASRGRSAEEIGKAMAEASPALAERKPGHEAD
YIERTVSKVMGLPSVQLARAELARAPAPRQRGMDRGGPDFSM"
gene 658..1629
/gene="repB"
/label=repB
CDS 1690..2529
/codon_start=1
/gene="repA"
/product="RepA"
/label=repA
/protein_id="AWD72714.1"
/translation="MATHKPINILEAFAAAPPPLDYVLPNMVAGTVGALVSPGGAGKSM
LALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLHALGAHLSAEERQAVAD
GLLIQPLIGSLPNIMAPEWFDGLKRAAEGRRLMVLDTLRRFHIEEENASGPMAQVIGRM
EAIAADTGCSIVFLHHASKGAAMMGAGDQQQASRGSSVLVDNIRWQSYLSSMTSAEAEE
WGVDDDQRRFFVRFGVSKANYGAPFADRWFRRHDGGVLKPAVLERQRKSKGVPRGEA"
gene 1690..2529
/gene="repA"
/label=repA
CDS 2516..3367
/codon_start=1
/gene="repC"
/product="RepC"
/label=repC
/protein_id="AWD72715.1"
/translation="MVKPKNKHSLSHVRHDPAHCLAPGLFRALKRGERKRSKLDVTYDY
GDGKRIEFSGPEPLGADDLRILQGLVAMAGPNGLVLGPEPKTEGGRQLRLFLEPKWEAV
TAECHVVKGSYRALAKEIGAEVDSGGALKHIQDCIERLWKVSIIAQNGRKRQGFRLLSE
YASDEADGRLYVALNPLIAQAVMGGGQHVRISMDEVRALDSETARLLHQRLCGWIDPGK
TGKASIDTLCGYVWPSEASGSTMRKRRQRVREALPELVALGWTVTEFAAGKYDITRPKA
AG"
gene 2516..3367
/gene="repC"
/label=repC
misc_feature 3561..3617
/label=MCS
/note="pUC18/19 multiple cloning site"
CDS 3706..4365
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=cat
/protein_id="AWD72716.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene 3706..4365
/gene="cat"
/label=cat