LOCUS       Exported                4311 bp ds-DNA     circular SYN 18-DEC-2018
DEFINITION  BioBrick cloning vector pSB4C5-I52002, complete sequence.
ACCESSION   EU496100
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 4311)
  AUTHORS   Shetty RP, Endy D, Knight TF Jr.
  TITLE     Engineering BioBrick vectors from BioBrick parts
  JOURNAL   J Biol Eng 2, 5 (2008)
  PUBMED    18410688
REFERENCE   2  (bases 1 to 4311)
  AUTHORS   Shetty RP, Endy D, Knight TF Jr.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2008) Biological Engineering, MIT, 32 Vassar 
            Street Room 32-311, Cambridge, MA 02139, USA
REFERENCE   3  (bases 1 to 4311)
  AUTHORS   .
  TITLE     Direct Submission
FEATURES             Location/Qualifiers
     source          1..4311
                     /organism="BioBrick cloning vector pSB4C5-I52002"
                     /mol_type="other DNA"
                     /db_xref="taxon:508435"
     misc_feature    1..21
                     /label=BioBrick cloning site suffix (BBa_G00001)
                     /note="BioBrick cloning site suffix (BBa_G00001)"
     misc_feature    35..46
                     /note="translational stop sequence for BioBrick 
                     vector-insert insulation, has stop codons in all 6 reading 
                     frames (BBa_B0042)"
     regulatory      47..115
                     /regulatory_class="terminator"
                     /note="derived from tonB terminator (BBa_B0054); similar to
                     Escherichia coli strain MG1655 accession U00096"
     stem_loop       57..88
                     /note="derived from tonB terminator, predicted using mFold"
     terminator      57..88
                     /label=tonB terminator
                     /note="bidirectional E. coli tonB-P14 transcription 
                     terminator"
     primer_bind     complement(116..135)
                     /note="VR reverse verfication primer annealing site 
                     (BBa_G00102)"
     regulatory      136..176
                     /regulatory_class="terminator"
                     /note="derived from ribosomal RNA rrnC operon, reverse 
                     orientation (BBa_B0062); similar to Escherichia coli strain
                     MG1655 accession U00096"
     stem_loop       complement(149..168)
                     /label=derived from ribosomal RNA rrnC operon
                     /note="derived from ribosomal RNA rrnC operon"
     rep_origin      184..2220
                     /label=pSC101 low copy replication origin (BBa_I50042)
                     /note="pSC101 low copy replication origin (BBa_I50042)"
     terminator      213..307
                     /label=lambda t0 terminator
                     /note="transcription terminator from phage lambda"
     misc_feature    320..687
                     /label=par region
                     /note="par region"
     rep_origin      799..1021
                     /label=pSC101 ori
                     /note="low-copy replication origin that requires the Rep101
                     protein"
     misc_feature    818..900
                     /label=AT rich region
                     /note="AT rich region"
     gene            1011..2019
                     /gene="rep101"
                     /label=rep101
     regulatory      1011..1016
                     /regulatory_class="minus_35_signal"
                     /gene="rep101"
     regulatory      1033..1038
                     /regulatory_class="minus_10_signal"
                     /gene="rep101"
     regulatory      1053..1065
                     /regulatory_class="ribosome_binding_site"
                     /gene="rep101"
     regulatory      1062..1067
                     /regulatory_class="ribosome_binding_site"
                     /gene="rep101"
     CDS             1069..2019
                     /codon_start=1
                     /gene="rep101"
                     /product="Rep101"
                     /label=rep101
                     /note="involved in plasmid replication"
                     /protein_id="ACB05492.1"
                     /translation="MSELVVFKANELAISRYDLTEHETKLILCCVALLNPTIENPTRKE
                     RTVSFTYNQYAQMMNISRENAYGVLAKATRELMTRTVEIRNPLVKGFEIFQWTNYAKFS
                     SEKLELVFSEEILPYLFQLKKFIKYNLEHVKSFENKYSMRIYEWLLKELTQKKTHKANI
                     EISLDEFKFMLMLENNYHEFKRLNQWVLKPISKDLNTYSNMKLVVDKRGRPTDTLIFQV
                     ELDRQMDLVTELENNQIKMNGDKIPTTITSDSYLRNGLRKTLHDALTAKIQLTSFEAKF
                     LSDMQSKHDLNGSFSWLTQKQRTTLENILAKYGRI"
     misc_feature    2229..2997
                     /label=CAT chloramphenicol resistance marker (BBa_P1004)
                     /note="CAT chloramphenicol resistance marker (BBa_P1004)"
     CDS             2335..2994
                     /codon_start=1
                     /gene="cat"
                     /product="chloramphenicol acetyl transferase"
                     /label=cat
                     /note="confers resistance to chloramphenicol"
                     /protein_id="ACB05491.1"
                     /translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
                     KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
                     LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
                     DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
     gene            2335..2994
                     /gene="cat"
                     /label=cat
     regulatory      3005..3076
                     /regulatory_class="terminator"
                     /note="derived from hisI terminator (BBa_B0053); similar to
                     Escherichia coli strain MG1655 accession U00096"
     stem_loop       3013..3047
                     /label=derived from hisI terminator
                     /note="derived from hisI terminator"
     primer_bind     3077..3096
                     /note="VF2 forward verification primer annealing site 
                     (BBa_G00100)"
     regulatory      3097..3174
                     /regulatory_class="terminator"
                     /note="derived from bacteriophage T3 terminator, reverse 
                     orientation (BBa_B0055); similar to bacteriophage T3 gene 1
                     to gene 11 (accession number X17255)"
     terminator      3124..3153
                     /label=T3Te terminator
                     /note="phage T3 early transcription terminator"
     stem_loop       complement(3132..3153)
                     /label=derived from bacteriophage T3 terminator
                     /note="derived from bacteriophage T3 terminator"
     misc_feature    3175..3186
                     /note="translational stop sequence for BioBrick 
                     vector-insert insulation, has stop codons in all 6 reading 
                     frames (BBa_B0042)"
     misc_feature    3200..3221
                     /label=BioBrick cloning site prefix (BBa_G00000)
                     /note="BioBrick cloning site prefix (BBa_G00000)"
     misc_feature    3222..3637
                     /label=ccdB positive selection marker (BBa_P1016)
                     /note="ccdB positive selection marker (BBa_P1016)"
     gene            3262..3634
                     /gene="ccdB"
                     /label=ccdB
     regulatory      3262..3267
                     /regulatory_class="minus_35_signal"
                     /gene="ccdB"
     regulatory      3285..3290
                     /regulatory_class="minus_10_signal"
                     /gene="ccdB"
     CDS             3329..3634
                     /codon_start=1
                     /gene="ccdB"
                     /product="CcdB"
                     /label=ccdB
                     /note="controlled cell death protein B; toxin protein that 
                     inhibits DNA gyrase which functions during DNA replication 
                     to catalyze negative supercoiling"
                     /protein_id="ACB05490.1"
                     /translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
                     VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
     rep_origin      3638..4311
                     /note="high copy replication origin derived from pUC19 
                     accession M77789 (BBa_I50022)"
     gene            3664..4252
                     /gene="RNAII"
                     /label=RNAII
     rep_origin      3664..4252
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     regulatory      3664..3669
                     /regulatory_class="minus_35_signal"
                     /gene="RNAII"
     regulatory      3685..3690
                     /regulatory_class="minus_10_signal"
                     /gene="RNAII"
     misc_RNA        3700..4252
                     /gene="RNAII"
                     /product="RNAII"
     gene            complement(3703..3846)
                     /gene="RNAI"
                     /label=RNAI
     misc_RNA        complement(3703..3810)
                     /gene="RNAI"
                     /product="RNAI"
     regulatory      complement(3819..3824)
                     /regulatory_class="minus_10_signal"
                     /gene="RNAI"
     regulatory      complement(3841..3846)
                     /regulatory_class="minus_35_signal"
                     /gene="RNAI"