LOCUS Exported 4603 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pSAT1A-ocsAocsP-nptII-ocsT, complete sequence.
ACCESSION DQ005460
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4603)
AUTHORS Chung SM, Frankman EL, Tzfira T.
TITLE A versatile vector system for multiple gene expression in plants
JOURNAL Trends Plant Sci. 10 (8), 357-361 (2005)
PUBMED 15993643
REFERENCE 2 (bases 1 to 4603)
AUTHORS Chung S-M., Tzfira T.
TITLE Direct Submission
JOURNAL Submitted (12-APR-2005) Department of Biochemistry and Cell Biology,
State University of New York at Stony Brook, Stony Brook, NY 11794,
USA
REFERENCE 3 (bases 1 to 4603)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4603
/organism="Cloning vector pSAT1A-ocsAocsP-nptII-ocsT"
/mol_type="other DNA"
/db_xref="taxon:326503"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 413..625
/label=OCS activator
/note="OCS activator"
regulatory 632..772
/regulatory_class="promoter"
/note="OCS promoter"
CDS 818..1612
/codon_start=1
/product="NptII"
/label=NptII
/note="kanamycin resistance"
/protein_id="AAY25363.1"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGDDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
regulatory 1631..2356
/regulatory_class="terminator"
/note="OCS terminator"
terminator 1647..2354
/label=OCS terminator
/note="octopine synthase terminator"
primer_bind complement(2382..2398)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2406..2422
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2430..2460)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2475..2496
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2784..3372)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3543..4403)
/codon_start=1
/product="Bla"
/label=Bla
/note="amp resistance"
/protein_id="AAY25364.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4404..4508)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 4603 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pSAT1A-ocsAocsP-nptII-ocsT, complete sequence.
ACCESSION DQ005460
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4603)
AUTHORS Chung SM, Frankman EL, Tzfira T.
TITLE A versatile vector system for multiple gene expression in plants
JOURNAL Trends Plant Sci. 10 (8), 357-361 (2005)
PUBMED 15993643
REFERENCE 2 (bases 1 to 4603)
AUTHORS Chung S-M., Tzfira T.
TITLE Direct Submission
JOURNAL Submitted (12-APR-2005) Department of Biochemistry and Cell Biology,
State University of New York at Stony Brook, Stony Brook, NY 11794,
USA
REFERENCE 3 (bases 1 to 4603)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4603
/organism="Cloning vector pSAT1A-ocsAocsP-nptII-ocsT"
/mol_type="other DNA"
/db_xref="taxon:326503"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 413..625
/label=OCS activator
/note="OCS activator"
regulatory 632..772
/regulatory_class="promoter"
/note="OCS promoter"
CDS 818..1612
/codon_start=1
/product="NptII"
/label=NptII
/note="kanamycin resistance"
/protein_id="AAY25363.1"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGDDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
regulatory 1631..2356
/regulatory_class="terminator"
/note="OCS terminator"
terminator 1647..2354
/label=OCS terminator
/note="octopine synthase terminator"
primer_bind complement(2382..2398)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2406..2422
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2430..2460)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2475..2496
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2784..3372)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3543..4403)
/codon_start=1
/product="Bla"
/label=Bla
/note="amp resistance"
/protein_id="AAY25364.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4404..4508)
/gene="bla"
/label=AmpR promoter