LOCUS Exported 6848 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Shuttle vector pRS436GAP DNA, complete sequence.
ACCESSION AB304862
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6848)
AUTHORS Mumberg D, Muller R, Funk M.
TITLE Yeast vectors for the controlled expression of heterologous proteins
in different genetic backgrounds
JOURNAL Gene 156 (1), 119-122 (1995)
PUBMED 7737504
REFERENCE 2 (bases 1 to 6848)
AUTHORS Ohto C, Muramatsu M, Obata S, Sakuradani E, Shimizu S.
TITLE Overexpression of the gene encoding HMG-CoA reductase in
Saccharomyces cerevisiae for production of prenyl alcohols
JOURNAL Appl. Microbiol. Biotechnol. 82 (5), 837-845 (2009)
PUBMED 19083230
REFERENCE 3 (bases 1 to 6848)
AUTHORS Ohto C.
TITLE Direct Submission
JOURNAL Submitted (24-MAY-2007) Contact:Chikara Ohto Toyota Motor
Corporation, Bio Research Laboratory, Future Project Division; 1,
Toyota-cho, Toyota, Aichi 471-8572, Japan
REFERENCE 4 (bases 1 to 6848)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6848
/organism="Shuttle vector pRS436GAP"
/mol_type="other DNA"
/note="Saccharomyces cerevisiae - Escherichia coli
expression shuttle vector"
/db_xref="taxon:446202"
promoter 201..416
/gene="S. cerevisiae URA3"
/label=URA3 promoter
CDS 417..1220
/codon_start=1
/gene="URA3"
/product="orotidine-5-phosphate decarboxylase"
/label=URA3
/protein_id="BAG16796.1"
/translation="MSKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELL
ELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQ
YSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLSTGE
YTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDD
VVSTGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN"
gene 417..1220
/gene="URA3"
/label=URA3
rep_origin 1743..2623
/label=2u ori
/note="yeast 2u plasmid origin of replication"
primer_bind 3487..3503
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 3513..3531
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
terminator 3550..3797
/gene="S. cerevisiae CYC1"
/label=CYC1 terminator
/note="transcription terminator for CYC1"
primer_bind 3807..3823
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(3857..3873)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
regulatory complement(3884..4570)
/regulatory_class="promoter"
/gene="TDH3"
gene complement(3884..4570)
/gene="TDH3"
/label=TDH3
promoter complement(3890..4556)
/gene="S. cerevisiae TDH3"
/label=GAP promoter
/note="promoter for glyceraldehyde-3-phosphate
dehydrogenase"
promoter complement(4588..4606)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(4627..4643)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 4651..4667
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4675..4705)
/label=lac promoter
/note="promoter for the E. coli lac operon"
rep_origin complement(5029..5617)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5788..6648)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(6649..6753)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 6848 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Shuttle vector pRS436GAP DNA, complete sequence.
ACCESSION AB304862
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6848)
AUTHORS Mumberg D, Muller R, Funk M.
TITLE Yeast vectors for the controlled expression of heterologous proteins
in different genetic backgrounds
JOURNAL Gene 156 (1), 119-122 (1995)
PUBMED 7737504
REFERENCE 2 (bases 1 to 6848)
AUTHORS Ohto C, Muramatsu M, Obata S, Sakuradani E, Shimizu S.
TITLE Overexpression of the gene encoding HMG-CoA reductase in
Saccharomyces cerevisiae for production of prenyl alcohols
JOURNAL Appl. Microbiol. Biotechnol. 82 (5), 837-845 (2009)
PUBMED 19083230
REFERENCE 3 (bases 1 to 6848)
AUTHORS Ohto C.
TITLE Direct Submission
JOURNAL Submitted (24-MAY-2007) Contact:Chikara Ohto Toyota Motor
Corporation, Bio Research Laboratory, Future Project Division; 1,
Toyota-cho, Toyota, Aichi 471-8572, Japan
REFERENCE 4 (bases 1 to 6848)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6848
/organism="Shuttle vector pRS436GAP"
/mol_type="other DNA"
/note="Saccharomyces cerevisiae - Escherichia coli
expression shuttle vector"
/db_xref="taxon:446202"
promoter 201..416
/gene="S. cerevisiae URA3"
/label=URA3 promoter
CDS 417..1220
/codon_start=1
/gene="URA3"
/product="orotidine-5-phosphate decarboxylase"
/label=URA3
/protein_id="BAG16796.1"
/translation="MSKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELL
ELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQ
YSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLSTGE
YTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDD
VVSTGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN"
gene 417..1220
/gene="URA3"
/label=URA3
rep_origin 1743..2623
/label=2u ori
/note="yeast 2u plasmid origin of replication"
primer_bind 3487..3503
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 3513..3531
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
terminator 3550..3797
/gene="S. cerevisiae CYC1"
/label=CYC1 terminator
/note="transcription terminator for CYC1"
primer_bind 3807..3823
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(3857..3873)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
regulatory complement(3884..4570)
/regulatory_class="promoter"
/gene="TDH3"
gene complement(3884..4570)
/gene="TDH3"
/label=TDH3
promoter complement(3890..4556)
/gene="S. cerevisiae TDH3"
/label=GAP promoter
/note="promoter for glyceraldehyde-3-phosphate
dehydrogenase"
promoter complement(4588..4606)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(4627..4643)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 4651..4667
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4675..4705)
/label=lac promoter
/note="promoter for the E. coli lac operon"
rep_origin complement(5029..5617)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5788..6648)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(6649..6753)
/gene="bla"
/label=AmpR promoter