LOCUS Exported 5616 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Yeast episomal vector pRS424 with TRP1 marker, complete sequence.
ACCESSION U03453
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5616)
AUTHORS Sikorski RS, Hieter P.
TITLE A system of shuttle vectors and yeast host strains designed for
efficient manipulation of DNA in Saccharomyces cerevisiae
JOURNAL Genetics 122 (1), 19-27 (1989)
PUBMED 2659436
REFERENCE 2 (bases 1 to 5616)
AUTHORS Christianson TW, Sikorski RS, Dante M, Shero JH, Hieter P.
TITLE Multifunctional yeast high-copy-number shuttle vectors
JOURNAL Gene 110 (1), 119-122 (1992)
PUBMED 1544568
REFERENCE 3 (bases 1 to 5616)
AUTHORS Stillman DJ.
TITLE Direct Submission
JOURNAL Submitted (11-NOV-1993) David J. Stillman, Dept. of Cellular, Viral
and Molecular Biology, University of Utah Medical Center, Salt Lake
City, UT 84132 USA
REFERENCE 4 (bases 1 to 5616)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5616
/organism="Cloning vector pRS424"
/mol_type="genomic DNA"
/db_xref="taxon:31843"
promoter 187..467
/gene="S. cerevisiae TRP1"
/label=TRP1 promoter
CDS 468..1142
/codon_start=1
/gene="S. cerevisiae TRP1"
/product="phosphoribosylanthranilate isomerase, required
for tryptophan biosynthesis"
/label=TRP1
/note="yeast auxotrophic marker"
/translation="MSVINFTGSSGPLVKVCGLQSTEAAECALDSDADLLGIICVPNRK
RTIDPVIARKISSLVKAYKNSSGTPKYLVGVFRNQPKEDVLALVNDYGIDIVQLHGDES
WQEYQEFLGLPVIKRLVFPKDCNILLSAASQKPHSFIPLFDSEAGGTGELLDWNSISDW
VGRQESPESLHFMLAGGLTPENVGDALRLNGVIGVDVSGGVETNGVKDSNKIANFVKNA
KK"
rep_origin complement(1241..1696)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
CDS complement(1479..2057)
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPSAQLTLTKGNKSWSSTAVAAALELVDPPGCRNSISSLSI
PSTSRGGPVPNSPYSESYYARSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEAR
TDRPSQQLRSLNGEWRDAPCSGALSAAGVVVTRSVTATLASALAPAPFAFFPSFLATFA
GFPRQALNRGLPLGFRFSALRHLDPKKLD"
primer_bind 1841..1857
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 1867..1885
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 1894..2001
/label=MCS
/note="pBluescript multiple cloning site"
primer_bind 1911..1927
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(1961..1977)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2014..2032)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2053..2069)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2077..2093
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2101..2131)
/label=lac promoter
/note="promoter for the E. coli lac operon"
rep_origin complement(2455..3043)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3214..4074)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4075..4179)
/gene="bla"
/label=AmpR promoter
rep_origin 4206..5548
/label=2u ori
/note="yeast 2u plasmid origin of replication"
protein_bind complement(5169..5216)
/label=FRT
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="FLP-mediated recombination occurs in the 8-bp core
sequence TCTAGAAA (Turan and Bode, 2011)."
LOCUS Exported 5616 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Yeast episomal vector pRS424 with TRP1 marker, complete sequence.
ACCESSION U03453
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5616)
AUTHORS Sikorski RS, Hieter P.
TITLE A system of shuttle vectors and yeast host strains designed for
efficient manipulation of DNA in Saccharomyces cerevisiae
JOURNAL Genetics 122 (1), 19-27 (1989)
PUBMED 2659436
REFERENCE 2 (bases 1 to 5616)
AUTHORS Christianson TW, Sikorski RS, Dante M, Shero JH, Hieter P.
TITLE Multifunctional yeast high-copy-number shuttle vectors
JOURNAL Gene 110 (1), 119-122 (1992)
PUBMED 1544568
REFERENCE 3 (bases 1 to 5616)
AUTHORS Stillman DJ.
TITLE Direct Submission
JOURNAL Submitted (11-NOV-1993) David J. Stillman, Dept. of Cellular, Viral
and Molecular Biology, University of Utah Medical Center, Salt Lake
City, UT 84132 USA
REFERENCE 4 (bases 1 to 5616)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5616
/organism="Cloning vector pRS424"
/mol_type="genomic DNA"
/db_xref="taxon:31843"
promoter 187..467
/gene="S. cerevisiae TRP1"
/label=TRP1 promoter
CDS 468..1142
/codon_start=1
/gene="S. cerevisiae TRP1"
/product="phosphoribosylanthranilate isomerase, required
for tryptophan biosynthesis"
/label=TRP1
/note="yeast auxotrophic marker"
/translation="MSVINFTGSSGPLVKVCGLQSTEAAECALDSDADLLGIICVPNRK
RTIDPVIARKISSLVKAYKNSSGTPKYLVGVFRNQPKEDVLALVNDYGIDIVQLHGDES
WQEYQEFLGLPVIKRLVFPKDCNILLSAASQKPHSFIPLFDSEAGGTGELLDWNSISDW
VGRQESPESLHFMLAGGLTPENVGDALRLNGVIGVDVSGGVETNGVKDSNKIANFVKNA
KK"
rep_origin complement(1241..1696)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
CDS complement(1479..2057)
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPSAQLTLTKGNKSWSSTAVAAALELVDPPGCRNSISSLSI
PSTSRGGPVPNSPYSESYYARSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEAR
TDRPSQQLRSLNGEWRDAPCSGALSAAGVVVTRSVTATLASALAPAPFAFFPSFLATFA
GFPRQALNRGLPLGFRFSALRHLDPKKLD"
primer_bind 1841..1857
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 1867..1885
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 1894..2001
/label=MCS
/note="pBluescript multiple cloning site"
primer_bind 1911..1927
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(1961..1977)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2014..2032)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2053..2069)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2077..2093
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2101..2131)
/label=lac promoter
/note="promoter for the E. coli lac operon"
rep_origin complement(2455..3043)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3214..4074)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4075..4179)
/gene="bla"
/label=AmpR promoter
rep_origin 4206..5548
/label=2u ori
/note="yeast 2u plasmid origin of replication"
protein_bind complement(5169..5216)
/label=FRT
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2u plasmid"
/note="FLP-mediated recombination occurs in the 8-bp core
sequence TCTAGAAA (Turan and Bode, 2011)."