LOCUS Exported 4970 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Yeast centromere vector pRS413 with HIS3 marker, complete sequence.
ACCESSION U03447
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4970)
AUTHORS Sikorski RS, Hieter P.
TITLE A system of shuttle vectors and yeast host strains designed for
efficient manipulation of DNA in Saccharomyces cerevisiae
JOURNAL Genetics 122 (1), 19-27 (1989)
PUBMED 2659436
REFERENCE 2 (bases 1 to 4970)
AUTHORS Christianson TW, Sikorski RS, Dante M, Shero JH, Hieter P.
TITLE Multifunctional yeast high-copy-number shuttle vectors
JOURNAL Gene 110 (1), 119-122 (1992)
PUBMED 1544568
REFERENCE 3 (bases 1 to 4970)
AUTHORS Stillman DJ.
TITLE Direct Submission
JOURNAL Submitted (11-NOV-1993) David J. Stillman, Dept. of Cellular, Viral
and Molecular Biology, University of Utah Medical Center, Salt Lake
City, UT 84132 USA
REFERENCE 4 (bases 1 to 4970)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4970
/organism="Cloning vector pRS413"
/mol_type="genomic DNA"
/db_xref="taxon:31838"
promoter 317..503
/gene="S. cerevisiae HIS3"
/label=HIS3 promoter
CDS 504..1163
/codon_start=1
/gene="S. cerevisiae HIS3"
/product="imidazoleglycerol-phosphate dehydratase, required
for histidine biosynthesis"
/label=HIS3
/note="yeast auxotrophic marker"
/translation="MTEQKALVKRITNETKIQIAISLKGGPLAIEHSIFPEKEAEAVAE
QATQSQVINVHTGIGFLDHMIHALAKHSGWSLIVECIGDLHIDDHHTTEDCGIALGQAF
KEALLARGVKRFGSGFAPLDEALSRAVVDLSNRPYAVVELGLQREKVGDLSCEMIPHFL
ESFAEASRITLHVDCLRGKNDHHRSESAFKALAVAIREATSPNGTNDVPSTKGVLM"
rep_origin complement(1423..1878)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
CDS complement(1661..2239)
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPSAQLTLTKGNKSWSSTAVAAALELVDPPGCRNSISSLSI
PSTSRGGPVPNSPYSESYYARSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEAR
TDRPSQQLRSLNGEWRDAPCSGALSAAGVVVTRSVTATLASALAPAPFAFFPSFLATFA
GFPRQALNRGLPLGFRFSALRHLDPKKLD"
primer_bind 2023..2039
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 2049..2067
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 2076..2183
/label=MCS
/note="pBluescript multiple cloning site"
primer_bind 2093..2109
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(2143..2159)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2196..2214)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2235..2251)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2259..2275
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2283..2313)
/label=lac promoter
/note="promoter for the E. coli lac operon"
rep_origin complement(2637..3225)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3396..4256)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4257..4361)
/gene="bla"
/label=AmpR promoter
misc_feature 4398..4901
/label=CEN/ARS
/note="S. cerevisiae CEN6 centromere fused to an
autonomously replicating sequence"
LOCUS Exported 4970 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Yeast centromere vector pRS413 with HIS3 marker, complete sequence.
ACCESSION U03447
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4970)
AUTHORS Sikorski RS, Hieter P.
TITLE A system of shuttle vectors and yeast host strains designed for
efficient manipulation of DNA in Saccharomyces cerevisiae
JOURNAL Genetics 122 (1), 19-27 (1989)
PUBMED 2659436
REFERENCE 2 (bases 1 to 4970)
AUTHORS Christianson TW, Sikorski RS, Dante M, Shero JH, Hieter P.
TITLE Multifunctional yeast high-copy-number shuttle vectors
JOURNAL Gene 110 (1), 119-122 (1992)
PUBMED 1544568
REFERENCE 3 (bases 1 to 4970)
AUTHORS Stillman DJ.
TITLE Direct Submission
JOURNAL Submitted (11-NOV-1993) David J. Stillman, Dept. of Cellular, Viral
and Molecular Biology, University of Utah Medical Center, Salt Lake
City, UT 84132 USA
REFERENCE 4 (bases 1 to 4970)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4970
/organism="Cloning vector pRS413"
/mol_type="genomic DNA"
/db_xref="taxon:31838"
promoter 317..503
/gene="S. cerevisiae HIS3"
/label=HIS3 promoter
CDS 504..1163
/codon_start=1
/gene="S. cerevisiae HIS3"
/product="imidazoleglycerol-phosphate dehydratase, required
for histidine biosynthesis"
/label=HIS3
/note="yeast auxotrophic marker"
/translation="MTEQKALVKRITNETKIQIAISLKGGPLAIEHSIFPEKEAEAVAE
QATQSQVINVHTGIGFLDHMIHALAKHSGWSLIVECIGDLHIDDHHTTEDCGIALGQAF
KEALLARGVKRFGSGFAPLDEALSRAVVDLSNRPYAVVELGLQREKVGDLSCEMIPHFL
ESFAEASRITLHVDCLRGKNDHHRSESAFKALAVAIREATSPNGTNDVPSTKGVLM"
rep_origin complement(1423..1878)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
CDS complement(1661..2239)
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPSAQLTLTKGNKSWSSTAVAAALELVDPPGCRNSISSLSI
PSTSRGGPVPNSPYSESYYARSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEAR
TDRPSQQLRSLNGEWRDAPCSGALSAAGVVVTRSVTATLASALAPAPFAFFPSFLATFA
GFPRQALNRGLPLGFRFSALRHLDPKKLD"
primer_bind 2023..2039
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 2049..2067
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 2076..2183
/label=MCS
/note="pBluescript multiple cloning site"
primer_bind 2093..2109
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
primer_bind complement(2143..2159)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2196..2214)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2235..2251)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2259..2275
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2283..2313)
/label=lac promoter
/note="promoter for the E. coli lac operon"
rep_origin complement(2637..3225)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3396..4256)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4257..4361)
/gene="bla"
/label=AmpR promoter
misc_feature 4398..4901
/label=CEN/ARS
/note="S. cerevisiae CEN6 centromere fused to an
autonomously replicating sequence"